Ictalurus punctatus (channel catfish): 108265721
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Entry
108265721 CDS
T04658
Symbol
bgna
Name
(RefSeq) biglycan a
KO
K08118
biglycan
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108265721 (bgna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108265721 (bgna)
Proteoglycans [BR:
ipu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
108265721 (bgna)
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_LRWD1
LRR_14
Motif
Other DBs
NCBI-GeneID:
108265721
NCBI-ProteinID:
XP_017323844
Ensembl:
ENSIPUG00000016711
UniProt:
A0A2D0QZW8
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Position
5:complement(33868408..33880496)
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AA seq
370 aa
AA seq
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MTTVVVTMLLLSASLLLSSALPFQQRGFWDFGEDIDVKDLMTMMMKDQEEGSGFEDVALP
EMPTCPFGCVCHLKVVQCSDLGLIYVPSNIPSDTLLLDLQCNGIMEIREGDFKGLSNLYA
LILRSNLISRVHPRAFLPLKRLQKLYISHNLLTSIPRNLPASLVELRIHDNLIRKVAAGT
FSALGNMHVIEMGRNPIHNSGFEPGAFKGLKLNYLRISEAKLTGVPKDLPASLHELHLDH
NEIQAIELEDLSRYKQLQRLGLGSNHILHIERGALSYLPSLRELHLDHNRLSSIPSGLPN
IKYLQVVYLHSNNITSVKVNDFCPTGFGVKKVFYNGISLFGNPIEYWEIQPATFRCVTDS
MAVQLGNHKK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtcgtcgtgacgatgctgctgctgtcagcatcgctcctcctgtcctccgct
cttcctttccagcagcgaggattctgggattttggcgaagatatcgatgtcaaagatctg
atgacgatgatgatgaaggaccaggaggaaggctcggggtttgaggatgtcgctctgccg
gagatgccaacgtgtccgttcgggtgcgtgtgtcacctgaaggtggtgcagtgctctgat
ctgggtttgatttatgtgccgtccaacatcccatctgatacgctgctgttggacctgcag
tgcaacggcatcatggagatccgtgagggagattttaaaggcctcagtaacctctatgcg
ctaattttgaggagtaatctgatctctcgagttcaccctcgtgccttcctgcctctgaag
cgcttgcagaagctctacatttcccacaacctgctcacctccatccctcgcaacctgcct
gcatctcttgttgagctgcgtatccatgacaacctcatccggaaagtagctgcagggacc
ttcagtgccctagggaacatgcatgtgatcgaaatgggtcgtaatcccatccacaacagc
ggatttgagcctggagcattcaagggtctcaaactgaactacctacgaatctccgaggca
aaactcaccggcgtaccaaaagatttgccagcaagtctccatgagctccatttggaccat
aatgagattcaggccatcgagctggaggacctaagccgatacaagcagctgcagaggctg
ggtctcgggtcgaatcatatcctgcatattgaacgcggtgcgctctcttacctgcccagc
ctgagagagcttcacctggaccacaaccgcctctccagcatccccagtggcctgcccaac
atcaaatacctgcaggtggtctatcttcactccaataacatcacctcagtgaaggtgaat
gatttctgcccgacggggtttggggtgaagaaggtcttctataacggcatcagtctgttc
gggaaccccattgaatactgggaaattcaacctgccaccttccgctgcgtcactgacagc
atggccgtgcagctcggcaaccataagaaatag
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