Ictalurus punctatus (channel catfish): 108265760
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Entry
108265760 CDS
T04658
Symbol
lhfpl5b
Name
(RefSeq) LHFPL tetraspan subfamily member 5 protein
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108265760 (lhfpl5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108265760 (lhfpl5b)
03037 Cilium and associated proteins [BR:
ipu03037
]
108265760 (lhfpl5b)
Transporters [BR:
ipu02000
]
Other transporters
Pores ion channels [TC:
1
]
108265760 (lhfpl5b)
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108265760 (lhfpl5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
Motif
Other DBs
NCBI-GeneID:
108265760
NCBI-ProteinID:
XP_017323915
UniProt:
A0A2D0R2A0
LinkDB
All DBs
Position
5:complement(21865523..21869698)
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AA seq
219 aa
AA seq
DB search
MEKMLPATEAVKIYQTNYVRNARAIGVLWAIFTICFAIITVVVFIQPYWIGDSVNTPQSG
YFGLFYYCIGNPITSELVCKGSVLDFNSIPSGAFKTAMFFVGTSMLLNVATMVSFCLFFF
CSAASVYKICAWVQTSSAVLLVMGCMIYPDGWDSPEVKRMCGERTSKYALGNCTVRWAYI
LALICILDALMLALVAFTLGNRQDKLLPDEFELETGGKS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgcttcctgccacagaggcggtcaaaatctaccagacaaactatgtgaga
aatgccagagctattggtgtcttgtgggcaattttcaccatctgctttgccatcatcaca
gtggtggtgttcattcagccctactggatcggtgacagtgtcaacactccacagtctggc
tacttcgggctcttctactactgcataggcaaccccatcacctcagaacttgtctgcaag
ggcagtgtgctcgactttaactccattccgtccggggcatttaagactgccatgttcttc
gtgggaacctcaatgctgcttaatgtggccaccatggtctcattctgtcttttcttcttc
tgcagtgcagcgagtgtgtataagatttgtgcatgggtgcagacctcttcagctgtgctg
ttggtgatgggctgtatgatttaccctgatggatgggactctcctgaggtaaagcggatg
tgtggcgagcggacgagcaagtacgcactggggaactgcacagtgcgctgggcctacatt
ttggcgctcatctgcatcctggatgcactcatgctcgcacttgtggccttcacactggga
aaccgacaggacaaactgctgcctgatgaatttgaactggagacaggaggaaaaagctga
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