Ictalurus punctatus (channel catfish): 108265762
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Entry
108265762 CDS
T04658
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108265762
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108265762
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108265762
Protein kinases [BR:
ipu01001
]
Serine/threonine kinases: Other
Other
108265762
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108265762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
LisH
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
108265762
NCBI-ProteinID:
XP_017323917
Ensembl:
ENSIPUG00000024966
UniProt:
A0A2D0QZU9
LinkDB
All DBs
Position
5:11353236..11380443
Genome browser
AA seq
1539 aa
AA seq
DB search
MASAIEGSVDSKAELTALLEQWEREQQGNTQDLVNILTKISELVERETEEYHKADPDPFD
DRHPGLYPGRANPECMLGHLLKILFKNDDFMNALVNSYVMTSREVPLNTAACRLLLNIMP
GLETAVVFQEKEGIVERLFKWAREAEEPLRIYATGLLGGAMENQDIAANYREENSVLVPL
MLQRLREIQEKDAESRKDFKRPSLRKSMEPLLPLDEEAVDGKFSPSPSRIHSENNTFGHE
SDGAVSPEHSLTKSSSRVHSGVKGVMKLAVPHQSELENPGEGARDFRKRMEQENGRKAKQ
KLNFSLPEPERNFSELSNSSWSEMSPWVIGNSYHLYPLTAGIEQRLILQYLTPLGEYQEL
LAVFMQLRARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVQKLLEI
PRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSLLAEVVSYTLWLLECSHASGCCHATMF
FSICFTFRAVLELFDNQDGLRRLVNLISTLEILNPEDQGALLSDDEIFSSRQTAKHTCMA
LRRYFEAHLAIKVEQVKQSLQRTEGGALIHPQPYYKPCSYTRDQVVEMVEFLIEHGPVRL
YWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILTVIPKTQLLLAEN
VSVLDEGGSTISTVGMSIVLVVAEGEVFVNDAEIQKSALQVVINCVCAPDKRISSIGKFI
SGAPRRRLPQSHRTSESVLAKMWNVVQSNNGIKVLLSLLTIKMPITDADQIRALACKALV
GLARSTTVRQIISKLPLFSSGQIQQLMKEPVLQDKRNDHVRFCKYAAELIEQVSGKPLLI
GTDVSLARLQRANVVAQTRIAFPEKELLLLIRNHLLSKGLTDTASALTKEADLPMGIHSH
AHASVAPFSQSVSTPPTPTAIPRSPRLANGVAARLGGHASHVTTSSHHLQPRPSTSQLPP
PAPPTSSHHSTVSLVGRIVFSRERPTTYAAGLKKPRVLRQKSDHGAFSQSPAMKKQLDRH
LPSPPALDSIITEYLREQHARCKNPVTTCPPFSLFMPHQCPEPKQRCQAPTNFTARHTRR
VAYPKYGGVDGGCFDRQLIFSRFRPISVFREAEEDESGFMCCAFSARERFLMLGTCTGQL
KLYNVFGGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFL
DDHYVEFSKLSQDRVIGTKEHIAHIYDIQTGQKTLTLNNPDLANNYKRNCATFNPTDDLV
LNDGVMWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQC
RIVFNNNGTVIYGAMLQADDEDEMMEQQMKSPFGSSFRTFDATDYKPIATIDVKRNIFDL
CTDTKDCYLAVIENQDSINMDTVCRLYGVGRQRLAEEEEDEEDQEDEDQEDEDDDDDSDD
DMDDIDTDPLMAELENENNGEEEEDGEQDFSPSDDEEVARLLEEDGEDDDDDDDDDDDDD
DDEEDDSEDNEGDVELVMDNTDSSDNSDLEDDIILSLNE
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgccatcgaaggcagcgtggactcgaaagcagagctcacagctctgctggag
caatgggagcgagaacaacaaggcaacactcaggacctggtcaacatattgaccaagata
tcagaacttgttgagagggagactgaggagtaccacaaggctgatcctgatccttttgat
gaccgccatccaggtttatatccaggacgggcaaacccagagtgcatgctgggacacctg
ttgaagatcctatttaagaatgatgattttatgaatgcgttggtgaactcgtatgtcatg
acaagcagagaagttccactgaacactgcagcatgccgactgttgctgaacatcatgcca
ggcctggagactgcagtagtctttcaagagaaggagggcattgtagagcgcctgtttaaa
tgggcccgggaggctgaggagcccctgagaatctatgctacaggtttgcttggaggagcc
atggagaaccaggatattgctgccaactaccgtgaggagaactccgttctggttccttta
atgctacaaaggctcagagaaatccaggagaaagatgcagaaagcaggaaggacttcaag
cggcccagtctacgcaaaagcatggagcccttgcttcctctggatgaggaagcagtggat
ggcaagttttcgcccagcccttcacgtattcactcggaaaataacactttcggccatgaa
tcggatggagcggtctctcctgagcacagtttaacgaaaagtagcagtcgagtccactct
ggtgtcaaaggtgtgatgaaattggctgtgccacaccagtctgagttggagaaccctggt
gaaggagcaagagatttcagaaaaaggatggagcaagagaatggtaggaaggccaaacag
aagctgaacttctcattgccagagccagagcgcaacttcagtgagttgtctaatagcagc
tggtcagagatgagcccgtgggtgattgggaacagctaccacttgtacccgcttacagca
ggcattgagcaacgtcttattcttcagtacctcacaccattgggggagtaccaggagctg
ttggctgtgttcatgcaacttcgtgctcgagagctcctcatgcattacatggatctaaaa
cagaccaatgatgtgcaattgacctttgaggccctcaagtacctggcctctctcctgctg
cataagaagtttgcagcagaattcgtggctcatggtggagtgcagaagcttttggaaatc
ccgcggccatccatggcagccacaggagtgtctctgtgtctctattaccttgcctacaac
caagatgctatggagagggtgtgtatgctaccccactccctcttagcggaagtggtgagt
tacactctgtggctgttggagtgttcacatgcctccgggtgctgtcatgccaccatgttc
ttttcgatttgcttcacgttccgagctgtacttgagctcttcgacaaccaggatggcctg
agacgccttgtcaacctgataagtactctggagatcttgaatccagaggatcagggggca
ctgctgagcgatgatgagattttctccagcaggcagacagccaaacacacatgcatggct
ctgcgccggtactttgaagcccacctggctattaaagtggaacaagtaaagcagagtctt
cagcgcacagagggaggagcactcatccatccccagccttactacaagccttgctcctac
actcgtgaccaggtggttgaaatggtggaattcctcattgagcatgggcctgtacgcctg
tattgggagcctgctgaggtcttccacaaactgtcctgtgtgcagctcctgctacagctc
atctccatcgcctgtgactggaggacatattatggcaggagtgacacagtgcggtatgca
ttggacatcctcagcattctgactgttatcccaaaaacgcagctcctgttggctgaaaat
gtgtctgtgctggatgaaggcgggtcgaccatctccacagtaggcatgagcatcgtcctg
gtggttgctgagggtgaggtgtttgtgaatgatgcagagatccagaagtcagctctgcag
gtggtgattaactgtgtgtgcgctcctgacaagcgtatctccagcatcggtaaattcatc
tcgggtgcaccacgacggcgtcttcctcagagccaccgcacaagtgaaagtgtcctggcc
aaaatgtggaatgtggtccagtccaataatggcatcaaggtcttgctctcgctgctcaca
atcaaaatgcccataacagatgctgaccaaatccgtgctctagcatgcaaagcattagtg
ggtttagcacgaagcaccacagtgcggcagattatcagcaaattaccactgttcagcagt
gggcagatccagcagctaatgaaggagcctgtgcttcaagataaacgcaacgaccatgta
cgcttttgtaaatatgctgctgagttaatagagcaagtatcaggaaagccgctgctaata
ggcacagatgtttcactagcacggttgcagcgtgccaacgttgtagcacaaacgcgcatc
gcgttccctgagaaggagttgcttctgctcattcggaatcatctgttgtcaaaaggtctc
accgatacagcttcagcgttaaccaaagaggctgacctacctatgggcatccattctcac
gctcatgccagcgtagcaccattttcacaatctgtgtccacgcctcccacaccaaccgcc
atcccacggagtcctcgccttgccaatggcgtggcagcacggctcggaggccatgcctct
catgtgactacttcatctcatcacctacagccccgcccatctacctcacagctcccaccc
ccagcccctcccacatcatctcaccacagcactgtctctcttgttggtcgaatcgtgttc
tcgagggaacggccgactacttatgccgcaggattgaagaaaccacgtgttttgaggcag
aaatcagaccatggtgcatttagccagagtccagctatgaagaaacagttggaccgccat
cttccttcacctccagctcttgatagtattataacagagtacctgagagagcagcatgcc
cgctgtaagaacccggtcaccacgtgccctccgttcagtctgttcatgcctcaccagtgt
ccagagccaaagcagaggtgccaggcacccacaaactttacagcacgtcacacacgcagg
gttgcctatccaaaatatgggggggtggatggaggctgctttgacaggcaacttatcttc
agcaggttcaggccaatctcagtgttcagggaagcagaggaggatgagagcggcttcatg
tgttgcgcattctcagcacgggagcgtttcctcatgttgggcacatgcacggggcagctc
aaactttacaatgtgttcggtggacaagaggaagccagctacagctgccatagttcagcc
atcacacaccttgagccatccagggatgggtctttactgttgacatctgcttcatggagt
tatcctctatctgcactctggggaatgaaatctgtcttcataatgaagcattccttttta
gatgatcattatgtggaattcagtaagctttcccaggacagagtaataggaacaaaggaa
cacattgcccatatttatgacattcaaactgggcaaaagaccctgaccttaaacaaccct
gacctggccaacaactacaagcggaactgcgccaccttcaatccgactgatgaccttgtg
ttaaatgatggggttatgtgggatgtgcgttcagcgcaggccatccacaagtttgataaa
ttcaacatgaacatcagtggcgttttccaccctaacggccttgaagtcatcatcaacaca
gagatatgggacttaaggactttccatttgctgcacactgtaccagcgctggatcagtgc
agaattgtgttcaacaacaatggaacggtcatttatggagcaatgcttcaggctgatgat
gaggatgaaatgatggagcagcagatgaaaagtccctttggatcctccttcaggaccttt
gatgctactgactacaaaccgatagccaccattgatgtgaagaggaacatttttgacctg
tgtactgacacaaaagactgttacctggcagtcattgaaaatcaagattctataaatatg
gacacagtgtgtcgactttatggagttggccgacagagactggctgaggaagaagaggat
gaggaggatcaggaggatgaagatcaggaggatgaggatgatgatgatgactcggatgac
gacatggatgatatcgacacagaccccctgatggctgagctggagaatgaaaataatggt
gaggaggaggaagatggtgagcaggatttttccccatctgatgatgaagaggtggctcgt
ctcctggaggaagatggtgaagatgatgacgatgatgatgacgacgacgacgacgacgat
gatgatgaagaggatgattctgaggacaatgagggagatgtagagctagttatggataac
acagatagctcagataactcagacctggaagacgacatcatactttccctgaatgagtga
DBGET
integrated database retrieval system
