Ictalurus punctatus (channel catfish): 108265764
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Entry
108265764 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108265764
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108265764
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108265764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIB_HERC2
SH3_15
Ank_2
Ank
Ank_5
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
Sina_RING
CUB_A2MG
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108265764
NCBI-ProteinID:
XP_017323922
Ensembl:
ENSIPUG00000023607
UniProt:
W5UEF4
LinkDB
All DBs
Position
5:complement(8849476..8941128)
Genome browser
AA seq
1004 aa
AA seq
DB search
MLSTVTPDLSPESPLLGTLPLPPARSRTSGPTTHPPAEPPARPHRKRSGEAGSGSASPPV
RGAMEVGMRVVRGVDWKWGNQDDGEGHVGTVVEVGRQGSTSTPDKTVVVQWDSGTRTNYR
TGYQGAYDLLLYDNAQIGVRHSNIICDSCKKHGIMGMRWKCKVCFDYDLCTHCYMNNKHD
LSHAFERYETAHSQPVSLAPRQNLSRIILKGIFQGVKVVRGPDWDWGNQDGGEGKIGKVV
DIRGWDQESGRSVASVTWSNGTTNVYRMGHKGKVDLKYVSDGQGGYYYKEHLPKLGEHAE
LQRQESADGHTFQQGDKVKCLLDVDILRQMQEGHGGWNPKMAEYICRIGTVHRITDRGDV
RVQYSNNIRWTFHPGALTKVNTFAVGELVRVLDDIETVKRLQAGHGEWTDSMAPALGQVG
KVLKLYADGDLRVAFGGQTWTFNPACLSAQPGEVDANLMTAENPSESRSTVISVLEKLLS
QSTEQDNPGRLVIEAAHGSAAKVRELVQKHPDKVDIKNQGKTALQVAAHQGHMEVVKVLL
QANSSIEAKDEDGDAALHYTAFGNQAEIARLLLSKGASVNLLNNSMCTALHIAVNKGFTD
VVRVLTENSADVNLQDSYGDTPLHDAISKDFRSIVEILTVVRNIDFTQQNDRGFNLLHHA
ALKGNKLATEKILARARQLVDVKKEDGFSALHVAALNNHYEVVEVLIKEGRCDVNIRNNR
GQTPLQLAVTQGHMRLVELLVLEGANVNAEDEEGDTAMHTSLTRQGLTTALSSTERDASN
LYSRLSSSGLLGNTELNVGAAIACFLAQEGADINYANHKGKSPLDLVTDSIVFQLIRSFS
EKYRLQAGTCGTGGSGSSSLRRVHTTPNTMTNLVMPSAPGPSECLICSELALLVLFSPCQ
HSVACEECAHRMKKCIKCQVTITKKIRQDQTEVDSSPNSESSEQHHLLERYRKMEERITC
PICIDNYIKLVFQCGHASCMECSSALKTCPICRQSIRERIQLFV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgacagtcacccctgacctgtctccggagagccccttactcggcaccctcccg
ctgccaccagctcgctcgcgtaccagcggccccaccacccatccccccgccgagccgcct
gcgcgaccccaccggaagcgcagcggcgaggccggaagtggcagtgctagcccacctgtc
cgcggtgccatggaggtgggtatgcgtgtggtgcgtggcgttgactggaagtggggcaac
caggacgatggtgagggccatgtgggcacagtggtggaagtggggcgccagggcagcacc
agcacacctgacaagaccgtagtggtgcagtgggacagcggcactcgcaccaactaccgc
accggctaccagggtgcctatgacctgctgctttatgacaacgcacagatcggtgtccgc
cactcaaacatcatttgcgacagctgtaagaagcatggcatcatgggaatgcgttggaaa
tgcaaggtgtgcttcgactatgacctgtgcacacattgctacatgaacaacaagcacgac
ctctcacacgctttcgagcgctacgagaccgcgcactcgcagccagtgagcttggcacca
aggcaaaacctgtcacggataatcctcaaaggaatcttccagggtgtaaaagtcgtccgc
ggacccgactgggattggggcaaccaagacggaggagaggggaagatcgggaaggtggtt
gatatccgaggttgggaccaagagtcaggccgcagcgtggccagcgtcacctggtccaac
ggcaccaccaacgtctacaggatgggtcacaaaggcaaggtggacctcaaatatgtctca
gatggccaaggaggttactactacaaggagcacctgcccaaactaggtgaacatgcagag
ctgcagaggcaggagagcgctgatggccacacgttccagcagggggataaggtaaaatgc
ctgctggacgtggacatcctcaggcagatgcaggaggggcatggaggctggaatcctaaa
atggcagagtacatctgcagaatcgggactgtgcacaggataacggaccgaggggacgtc
agagtccagtacagtaacaatatacgttggactttccacccaggcgctctgactaaagtg
aatacgtttgcagtaggtgagttggtgagggtactggacgatatcgagactgtgaagagg
ctacaagctggccatggagagtggactgacagcatggcacctgccctgggccaggttggc
aaggttttgaaattgtatgcggatggtgacctgcgcgtggcatttggaggacagacgtgg
acttttaaccctgcatgtctctcggcccagcctggcgaggtggacgccaatctgatgacg
gctgaaaatccaagtgaatcaagatccacagtcatttcagtcctggagaagctgttgtct
cagtccacggagcaggataaccccgggcgcctggtcatcgaggctgctcatggcagcgct
gctaaagttcgcgagctagtgcagaaacatccggataaggtggatataaagaaccagggg
aagacggccctccaggtggctgctcaccagggccatatggaagtagtgaaggtcctgctg
caggccaacagcagcatcgaggccaaggacgaagacggagatgcagctctgcactacaca
gcattcgggaaccaagccgaaatcgcacgcctcctcctgagcaaaggggccagcgtcaac
ctgctgaacaactccatgtgtactgcgctccacatcgccgtcaacaagggcttcactgac
gtagtgagggtactgaccgagaactccgccgacgtcaacctgcaggactcgtatggggac
acacctctacacgatgccatttctaaggacttccggagtatcgttgagatcctgaccgtg
gtgcgcaacattgactttacgcagcagaacgaccgtggcttcaacctgctgcaccatgca
gcgctgaagggcaacaaacttgcaacagagaagattctggcacgtgctcggcagctggtc
gacgtgaagaaggaagatggcttctcagctcttcacgtggcagctctcaataaccactac
gaggtggtcgaggtcctcatcaaagagggccgctgtgatgtcaacatccgcaacaaccgt
ggtcagacacctctgcagctggcggtcacgcagggccacatgcggctggtggagctcctg
gtgttggagggagccaacgtgaatgctgaggacgaggagggagacacggccatgcacacg
tccctcacccgccaaggactcaccaccgccctgagcagcacagagagagatgcctcaaac
ctctacagccgactgagcagctcagggctgttggggaacacagagctgaacgtcggggct
gctatagcctgtttcctggctcaagagggtgccgatataaactacgccaaccataaaggc
aagagtccactggacctggtgacggacagcatcgtgtttcagctgatcaggagcttctcc
gagaaataccgactgcaggccggtacgtgtgggacgggtggcagtggaagcagcagtctg
aggcgggttcacaccacaccaaacaccatgaccaacctggtcatgcccagcgcaccaggt
cccagcgagtgcctcatctgctccgagctcgctctgcttgtgctcttctccccgtgccag
cacagtgtcgcctgcgaagaatgtgctcacagaatgaagaaatgcatcaaatgccaggtc
accatcaccaagaaaatacggcaagaccaaacagaggtagacagcagtccaaattcggag
agctcggagcagcaccacctgctggagcgctacaggaagatggaggagcgcatcacttgc
cccatctgcatcgacaactacatcaagcttgtgtttcagtgtggccacgcctcctgcatg
gagtgcagctccgccctcaagacctgccccatatgccgccagagcatccgcgaaaggatc
cagctttttgtctga
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