Ictalurus punctatus (channel catfish): 108265771
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Entry
108265771 CDS
T04658
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108265771 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108265771 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108265771 (pdlim2)
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
zf_C2H2_13
Motif
Other DBs
NCBI-GeneID:
108265771
NCBI-ProteinID:
XP_017323937
Ensembl:
ENSIPUG00000009855
UniProt:
W5UEX6
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All DBs
Position
5:5734226..5796172
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AA seq
365 aa
AA seq
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MAFTMNLAGPSPWGFRISGGRDFKKAITVSKVNPGSKAEKASLQPGDVIMEINGENTGDM
LNVEAQNKIKNSTTRLQLLVERPAPSSPGQTNGISSTEQLVGRFKETLHVRDENQNYREY
SISSPKSFSPGPYSPEPPSSPERKGDRIMPTTKSPVFHSWTPEEKITSNRLSRPLSQEFS
PADFRSNSASSRTPTPPERYSPHSPMEREIPVSPRRNSSDFAMQRFDRESEVYKMIQENK
ESRAAPRQSNTFKMLQEVLEADEKEAALRFPGKLSPNPPKPVSPVAGVQKYHICEKCGNN
IVTQAVRIVDERFRHPECYTCTDCGLNLKMRGHFWVENELFCEKHARERYQGPGAGYRYH
VSPQH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggctttcacaatgaacctggctggcccgtctccctggggcttcagaatatctggtggg
cgggacttcaagaaggccataacagtctccaaggtgaaccccggcagtaaagccgagaag
gcctctctccaacccggcgacgtaatcatggaaataaatggagaaaacaccggtgacatg
ctgaacgtagaggcacaaaacaaaatcaagaactccacaacacgactgcagctgctagtg
gagaggccagccccttcgagtccaggtcaaaccaacgggatcagttccacagagcaactg
gtgggccgtttcaaggaaaccctgcatgtgagggatgagaaccagaactacagagagtac
tccatctccagccccaaatctttctctccaggcccatactctccagagccaccctccagc
cctgaacgtaagggggacaggatcatgcccaccacgaagagcccagtgttccactcctgg
actcctgaagagaaaatcaccagtaaccgactgtccaggccactttcccaggagttttcc
ccggcggacttccgcagcaactctgcgtccagtcgaactccgacgcctcctgaacgctac
tcgccacacagtccgatggagcgcgagatacccgtctccccccgccgcaacagctcggac
tttgcgatgcagcggttcgatcgtgaatcggaggtgtacaagatgatccaggagaacaag
gagtcccgcgcagctcctcgccagtccaacaccttcaaaatgctgcaagaggtgttggag
gcggatgagaaagaggctgctctcaggtttccagggaagctgtcgccgaacccaccgaag
cctgtgtcgcctgtcgctggagtgcagaaataccacatctgtgaaaaatgtggcaacaac
atcgtcacccaggcggtgaggatcgtggacgagcgtttccgccaccccgagtgctacacg
tgcacagactgcggcctcaacctgaagatgcgcggccacttctgggtggaaaacgagctg
ttctgcgagaagcatgcacgcgaacgctatcaggggcccggtgcgggctaccgctaccac
gtctcccctcagcactga
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