KEGG   Ictalurus punctatus (channel catfish): 108265771
Entry
108265771         CDS       T04658                                 
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108265771 (pdlim2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ipu04990]
    108265771 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:ipu04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   108265771 (pdlim2)
SSDB
Motif
Pfam: PDZ DUF4749 PDZ_6 LIM PDZ_2 DmmA-like_C zf_C2H2_13
Other DBs
NCBI-GeneID: 108265771
NCBI-ProteinID: XP_017323937
Ensembl: ENSIPUG00000009855
UniProt: W5UEX6
LinkDB
Position
5:5734226..5796172
AA seq 365 aa
MAFTMNLAGPSPWGFRISGGRDFKKAITVSKVNPGSKAEKASLQPGDVIMEINGENTGDM
LNVEAQNKIKNSTTRLQLLVERPAPSSPGQTNGISSTEQLVGRFKETLHVRDENQNYREY
SISSPKSFSPGPYSPEPPSSPERKGDRIMPTTKSPVFHSWTPEEKITSNRLSRPLSQEFS
PADFRSNSASSRTPTPPERYSPHSPMEREIPVSPRRNSSDFAMQRFDRESEVYKMIQENK
ESRAAPRQSNTFKMLQEVLEADEKEAALRFPGKLSPNPPKPVSPVAGVQKYHICEKCGNN
IVTQAVRIVDERFRHPECYTCTDCGLNLKMRGHFWVENELFCEKHARERYQGPGAGYRYH
VSPQH
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggctttcacaatgaacctggctggcccgtctccctggggcttcagaatatctggtggg
cgggacttcaagaaggccataacagtctccaaggtgaaccccggcagtaaagccgagaag
gcctctctccaacccggcgacgtaatcatggaaataaatggagaaaacaccggtgacatg
ctgaacgtagaggcacaaaacaaaatcaagaactccacaacacgactgcagctgctagtg
gagaggccagccccttcgagtccaggtcaaaccaacgggatcagttccacagagcaactg
gtgggccgtttcaaggaaaccctgcatgtgagggatgagaaccagaactacagagagtac
tccatctccagccccaaatctttctctccaggcccatactctccagagccaccctccagc
cctgaacgtaagggggacaggatcatgcccaccacgaagagcccagtgttccactcctgg
actcctgaagagaaaatcaccagtaaccgactgtccaggccactttcccaggagttttcc
ccggcggacttccgcagcaactctgcgtccagtcgaactccgacgcctcctgaacgctac
tcgccacacagtccgatggagcgcgagatacccgtctccccccgccgcaacagctcggac
tttgcgatgcagcggttcgatcgtgaatcggaggtgtacaagatgatccaggagaacaag
gagtcccgcgcagctcctcgccagtccaacaccttcaaaatgctgcaagaggtgttggag
gcggatgagaaagaggctgctctcaggtttccagggaagctgtcgccgaacccaccgaag
cctgtgtcgcctgtcgctggagtgcagaaataccacatctgtgaaaaatgtggcaacaac
atcgtcacccaggcggtgaggatcgtggacgagcgtttccgccaccccgagtgctacacg
tgcacagactgcggcctcaacctgaagatgcgcggccacttctgggtggaaaacgagctg
ttctgcgagaagcatgcacgcgaacgctatcaggggcccggtgcgggctaccgctaccac
gtctcccctcagcactga

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