KEGG   Ictalurus punctatus (channel catfish): 108265803
Entry
108265803         CDS       T04658                                 
Name
(RefSeq) semaphorin-6A isoform X1
  KO
K06842  semaphorin 6
Organism
ipu  Ictalurus punctatus (channel catfish)
SSDB
Motif
Pfam: Sema PSI DUF3481
Other DBs
NCBI-GeneID: 108265803
NCBI-ProteinID: XP_017323984
Ensembl: ENSIPUG00000025112
UniProt: A0A2D0R0B0
LinkDB
Position
5:19235813..19311454
AA seq 969 aa
MRSEALLLYFTLLQMAGAAFPEDSEPITISHGNYTKHYPVFVGHRPGRNNTQRHKLDIQL
IVITNRTLYIAARDHIYTVDIDTANTEEIFFNKKLTWKSRQPDVDTCRMKGKHKDECHNF
IKVLLQQNEDTLFVCGTNAFNPSCQTYKTDTLDALGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDFIYFFFREIA
MEYNSMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKARLNCSIPGDSHFYFNILQAVT
DVIRINGRDVVMATFSTPFNSIPGSAVCAYDMADIATAFTGRFKEQKSPESTWTPVPEEK
VPKPRPGCCATTPSAEKYKVSNEFPDDTLNFIKMHPLMDEAVPSIANRPWFLKTMVRYRL
TRIAVDNAAGPYRNYTIVFLGSERGIILKFLAKVSSGFLNDSLFLEELSIYSPEKCSIDG
VDDKRIISMQIDSKSHSLFVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGTC
REITSTKWPFEQDVEQGNTDGLGDCQNSFVALNGHSTSSLSTVQPKDPPEPNDKRDPYIA
VPSLTQHESTGVIRESFQKGRDQMVPITLLAVAVVLAFIMGAVFSGIVVYCVCDHRRRHL
ELSARKKTKEAVNSRRGSMNSVTKLTGLFETQAKDGRPEAILAPLMHNGKTLIKAEEQQH
LDLVALPTPESTPMQLRRKPSRASRDWERNQNLINACAKELVSMGSPNVLIGTDLPLRAS
PGHIPSVVVLPLQQHQHQQVYQHQHEYVEQPHRTDLPDDQAATLEYKTMKSPCHNVMVDS
DGVPPRVPQREASLAAVVPPAVPQMGKRLDMYCRGYPMGMKKQQHNTNSSNSSHLSRKRS
FSRAETPPPAPQRLDSMHVSSPSGLSRHSSLSSYGSLPRCSSRHRKPDVPPKPSQFALSG
KVKCSDSGT
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgaggtcagaggccttgttgctgtatttcaccctgctgcagatggctggggccgccttc
ccagaggactcggagccaatcactatttcacatggcaactatacaaaacattatccagtg
tttgttggacacagaccaggaaggaacaacacacaacggcacaaattggatattcagctg
atcgtcataacgaatcggactctttatatagccgcaagggatcacatatatacagtggac
attgacacagccaacacagaggagatctttttcaacaagaaactcacatggaagtccaga
caacctgatgtggatacctgtagaatgaaaggaaagcacaaagacgaatgccacaatttt
atcaaggtccttctccagcaaaatgaagacaccttgtttgtgtgtgggaccaacgcgttc
aacccttcttgtcaaacctacaagacggacacactggatgcgcttggggaggagattagt
ggaatggcccggtgcccatatgatgccaagcatgccaacgttgccctgtttgctgatgga
aagttgtactctgctacagtcactgacttcctggccatcgatgccgttatttatcgtagc
ctgggagacagtccgactctgcgcacagttaaacacgattcaaaatggctgaaagagccc
tactttgttcaggcagtggattatggggacttcatttactttttctttcgagaaatcgct
atggaatacaacagcatgggaaaggtggtcttcccacgagtagcccgcgtgtgtaagaac
gaccgcggcggctcacagcgcgtactggagaaacagtggacatcgttcctgaaggctcgc
ctcaactgttccatcccaggagattcgcacttctacttcaacatcctgcaggctgtcact
gacgtcatccgcatcaacggccgtgatgttgtcatggccaccttctccacgccgtttaac
agcattcccggctcagccgtgtgcgcctacgacatggcggacatcgccacagctttcact
ggccgtttcaaggagcagaagtcgccagagtcgacctggacacccgtacccgaagagaaa
gttcccaagcccaggccgggttgctgtgccacaacaccatcagcagagaagtacaaggtg
tccaacgagtttccagacgacacactgaacttcattaagatgcacccgttgatggatgag
gccgtaccatccatcgccaaccggccctggtttctcaagacaatggttcgatatcggctc
actcgcattgcagtggataacgccgccgggccctatcgcaactacaccattgttttcctg
ggctccgagaggggcatcatccttaagttcctggctaaagtaagcagcggctttctgaac
gacagcttatttctggaggagctgagcatctacagcccggagaagtgcagtattgatggc
gtggatgacaagcgcattatcagcatgcagatcgacagcaagagtcactcactcttcgtg
gcattcacatcttgtgtggttaaggtgccactgtcgcgctgtgagcgacatgggaagtgc
aaaaagtcctgtatcgcctccagggatccgtactgcggctgggtgtcagaaggcacgtgc
cgggaaatcacaagcacaaaatggccgttcgagcaggacgtggagcagggcaacacagat
ggactgggagactgccaaaactcctttgtggctctcaatggccactccacctcttctctc
agcactgtgcagcccaaagatccccctgaacccaacgataagagggacccttatatcgca
gtgccctcactaacccagcacgagtccaccggcgtgattcgtgagagcttccagaagggc
cgtgatcagatggtgcccatcactctactggccgtggctgtggtcctggcatttatcatg
ggtgctgtcttctctggtattgtggtctactgtgtgtgtgaccatcgccggcgtcatctc
gagctctccgcgcgcaaaaaaaccaaggaggctgtgaactccaggcgcggctccatgaac
agcgtcaccaagctgacaggcctgtttgagacgcaagccaaagatggccggcccgaggcc
atcctcgctcctctgatgcacaatggtaagacacttatcaaagccgaggagcagcagcac
ctggacctggtggcacttcccacacccgaatcaacacccatgcagctgcgccgcaagccc
agccgtgccagccgggattgggagaggaaccagaacctaattaatgcctgcgccaaagag
ttggtttccatgggctcgcctaatgtcctgataggcactgacctgccactgagggcgtct
ccaggccacatccccagtgtggtggtgctacctttacaacagcaccagcaccagcaggtc
taccagcaccagcatgagtatgtagagcagccgcatcgcacagatttgcctgacgatcaa
gcagccacgctggagtacaaaacaatgaagagcccatgccacaatgtgatggtggattca
gatggggtgccaccccgcgtgccccagagggaagcctcattagcagctgtggtacctcca
gctgttcctcagatgggcaagaggctagatatgtactgtcgtggatacccaatgggaatg
aaaaagcagcagcacaataccaattcgtccaactcgtctcacctgtcaaggaagcgtagc
tttagccgtgccgagacaccacccccggctccacagaggcttgactccatgcacgtttct
tctccttcaggcctttcacgtcactccagtttgagctcatacggctcgttgcctcgctgc
agctccaggcaccgcaaaccagacgtcccacccaaaccttcacagttcgccctctctggg
aaagttaagtgcagcgactcagggacataa

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