Ictalurus punctatus (channel catfish): 108265803
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Entry
108265803 CDS
T04658
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
ipu
Ictalurus punctatus (channel catfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
108265803
NCBI-ProteinID:
XP_017323984
Ensembl:
ENSIPUG00000025112
UniProt:
A0A2D0R0B0
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Position
5:19235813..19311454
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AA seq
969 aa
AA seq
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MRSEALLLYFTLLQMAGAAFPEDSEPITISHGNYTKHYPVFVGHRPGRNNTQRHKLDIQL
IVITNRTLYIAARDHIYTVDIDTANTEEIFFNKKLTWKSRQPDVDTCRMKGKHKDECHNF
IKVLLQQNEDTLFVCGTNAFNPSCQTYKTDTLDALGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDFIYFFFREIA
MEYNSMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKARLNCSIPGDSHFYFNILQAVT
DVIRINGRDVVMATFSTPFNSIPGSAVCAYDMADIATAFTGRFKEQKSPESTWTPVPEEK
VPKPRPGCCATTPSAEKYKVSNEFPDDTLNFIKMHPLMDEAVPSIANRPWFLKTMVRYRL
TRIAVDNAAGPYRNYTIVFLGSERGIILKFLAKVSSGFLNDSLFLEELSIYSPEKCSIDG
VDDKRIISMQIDSKSHSLFVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGTC
REITSTKWPFEQDVEQGNTDGLGDCQNSFVALNGHSTSSLSTVQPKDPPEPNDKRDPYIA
VPSLTQHESTGVIRESFQKGRDQMVPITLLAVAVVLAFIMGAVFSGIVVYCVCDHRRRHL
ELSARKKTKEAVNSRRGSMNSVTKLTGLFETQAKDGRPEAILAPLMHNGKTLIKAEEQQH
LDLVALPTPESTPMQLRRKPSRASRDWERNQNLINACAKELVSMGSPNVLIGTDLPLRAS
PGHIPSVVVLPLQQHQHQQVYQHQHEYVEQPHRTDLPDDQAATLEYKTMKSPCHNVMVDS
DGVPPRVPQREASLAAVVPPAVPQMGKRLDMYCRGYPMGMKKQQHNTNSSNSSHLSRKRS
FSRAETPPPAPQRLDSMHVSSPSGLSRHSSLSSYGSLPRCSSRHRKPDVPPKPSQFALSG
KVKCSDSGT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaggccttgttgctgtatttcaccctgctgcagatggctggggccgccttc
ccagaggactcggagccaatcactatttcacatggcaactatacaaaacattatccagtg
tttgttggacacagaccaggaaggaacaacacacaacggcacaaattggatattcagctg
atcgtcataacgaatcggactctttatatagccgcaagggatcacatatatacagtggac
attgacacagccaacacagaggagatctttttcaacaagaaactcacatggaagtccaga
caacctgatgtggatacctgtagaatgaaaggaaagcacaaagacgaatgccacaatttt
atcaaggtccttctccagcaaaatgaagacaccttgtttgtgtgtgggaccaacgcgttc
aacccttcttgtcaaacctacaagacggacacactggatgcgcttggggaggagattagt
ggaatggcccggtgcccatatgatgccaagcatgccaacgttgccctgtttgctgatgga
aagttgtactctgctacagtcactgacttcctggccatcgatgccgttatttatcgtagc
ctgggagacagtccgactctgcgcacagttaaacacgattcaaaatggctgaaagagccc
tactttgttcaggcagtggattatggggacttcatttactttttctttcgagaaatcgct
atggaatacaacagcatgggaaaggtggtcttcccacgagtagcccgcgtgtgtaagaac
gaccgcggcggctcacagcgcgtactggagaaacagtggacatcgttcctgaaggctcgc
ctcaactgttccatcccaggagattcgcacttctacttcaacatcctgcaggctgtcact
gacgtcatccgcatcaacggccgtgatgttgtcatggccaccttctccacgccgtttaac
agcattcccggctcagccgtgtgcgcctacgacatggcggacatcgccacagctttcact
ggccgtttcaaggagcagaagtcgccagagtcgacctggacacccgtacccgaagagaaa
gttcccaagcccaggccgggttgctgtgccacaacaccatcagcagagaagtacaaggtg
tccaacgagtttccagacgacacactgaacttcattaagatgcacccgttgatggatgag
gccgtaccatccatcgccaaccggccctggtttctcaagacaatggttcgatatcggctc
actcgcattgcagtggataacgccgccgggccctatcgcaactacaccattgttttcctg
ggctccgagaggggcatcatccttaagttcctggctaaagtaagcagcggctttctgaac
gacagcttatttctggaggagctgagcatctacagcccggagaagtgcagtattgatggc
gtggatgacaagcgcattatcagcatgcagatcgacagcaagagtcactcactcttcgtg
gcattcacatcttgtgtggttaaggtgccactgtcgcgctgtgagcgacatgggaagtgc
aaaaagtcctgtatcgcctccagggatccgtactgcggctgggtgtcagaaggcacgtgc
cgggaaatcacaagcacaaaatggccgttcgagcaggacgtggagcagggcaacacagat
ggactgggagactgccaaaactcctttgtggctctcaatggccactccacctcttctctc
agcactgtgcagcccaaagatccccctgaacccaacgataagagggacccttatatcgca
gtgccctcactaacccagcacgagtccaccggcgtgattcgtgagagcttccagaagggc
cgtgatcagatggtgcccatcactctactggccgtggctgtggtcctggcatttatcatg
ggtgctgtcttctctggtattgtggtctactgtgtgtgtgaccatcgccggcgtcatctc
gagctctccgcgcgcaaaaaaaccaaggaggctgtgaactccaggcgcggctccatgaac
agcgtcaccaagctgacaggcctgtttgagacgcaagccaaagatggccggcccgaggcc
atcctcgctcctctgatgcacaatggtaagacacttatcaaagccgaggagcagcagcac
ctggacctggtggcacttcccacacccgaatcaacacccatgcagctgcgccgcaagccc
agccgtgccagccgggattgggagaggaaccagaacctaattaatgcctgcgccaaagag
ttggtttccatgggctcgcctaatgtcctgataggcactgacctgccactgagggcgtct
ccaggccacatccccagtgtggtggtgctacctttacaacagcaccagcaccagcaggtc
taccagcaccagcatgagtatgtagagcagccgcatcgcacagatttgcctgacgatcaa
gcagccacgctggagtacaaaacaatgaagagcccatgccacaatgtgatggtggattca
gatggggtgccaccccgcgtgccccagagggaagcctcattagcagctgtggtacctcca
gctgttcctcagatgggcaagaggctagatatgtactgtcgtggatacccaatgggaatg
aaaaagcagcagcacaataccaattcgtccaactcgtctcacctgtcaaggaagcgtagc
tttagccgtgccgagacaccacccccggctccacagaggcttgactccatgcacgtttct
tctccttcaggcctttcacgtcactccagtttgagctcatacggctcgttgcctcgctgc
agctccaggcaccgcaaaccagacgtcccacccaaaccttcacagttcgccctctctggg
aaagttaagtgcagcgactcagggacataa
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