Ictalurus punctatus (channel catfish): 108265807
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Entry
108265807 CDS
T04658
Symbol
efna5b
Name
(RefSeq) ephrin-A5b isoform X1
KO
K05462
ephrin-A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108265807 (efna5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108265807 (efna5b)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108265807 (efna5b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108265807 (efna5b)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Growth factors (RTK binding)
108265807 (efna5b)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108265807 (efna5b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Others
108265807 (efna5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
108265807
NCBI-ProteinID:
XP_017323993
Ensembl:
ENSIPUG00000025072
UniProt:
W5UGW8
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All DBs
Position
5:18546283..18651277
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AA seq
231 aa
AA seq
DB search
MMLQVEMVLFMCVLLWMCVLSQEPSSKVMADRYAVYWNRTNPRFHRGDYHIDVCINDYLD
VYCPHYEDSVPEERTERYVLYMVNYDGYSTCDDTAKGFKRWECNRPHSPNGPLKFSEKFQ
LFTPFSLGFEFRPGREYYYISSMVTESGRKGCLKLKVFVRPANSCVKTIGVHDRVFDVND
KVDNSLEPRDDTSHESAEPSRSDTANSGHQPLMARALIAFLLFCISALLSL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcaagtggaaatggtgctgttcatgtgtgtgctgctgtggatgtgtgtcctg
agccaagagccgagctccaaggtgatggccgaccgatacgctgtctactggaaccgcaca
aaccccaggtttcaccgtggagactaccacatcgatgtctgcataaatgactacttggac
gtctactgcccacactatgaggactcagtgcccgaggagaggaccgagcgctatgtcctc
tacatggtgaactacgatggctacagcacatgtgatgacacagccaagggcttcaagcgt
tgggaatgcaacaggccacactcacccaatggcccgctcaaattctctgagaagttccag
ctcttcacacccttctccttgggttttgagttccggccaggccgagagtattattatata
tcatccatggttacagagagtggaagaaaaggttgtcttaagctgaaagtttttgtcaga
ccagcaaacagctgtgtgaaaaccataggtgttcatgaccgagtgtttgatgttaatgac
aaagtagacaattcattagaaccaagagatgacaccagtcacgaatcagctgaaccatct
cggagtgatacagctaattcagggcatcagcccctgatggcacgtgcactgatagctttc
ttgttgttctgcatctctgcacttctctccttatag
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