Ictalurus punctatus (channel catfish): 108265814
Help
Entry
108265814 CDS
T04658
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18807
toll-like receptor 12
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ipu04054
]
108265814
Pattern recognition receptors [BR:
ipu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
108265814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_5
LRR_4
LIFR_N
YdiH
Motif
Other DBs
NCBI-GeneID:
108265814
NCBI-ProteinID:
XP_017324018
Ensembl:
ENSIPUG00000003933
UniProt:
A0A2D0R044
LinkDB
All DBs
Position
1:9610830..9621280
Genome browser
AA seq
955 aa
AA seq
DB search
MGMYKPATVCSSPCLCLRFILYFSMSSVVAALISKRCMTFDEHLLNDIGTLCYHQPGLGP
YGECKNVDFQKDLLEVETGIRSLCIYSDSTVIPASAFSHLATLEHLVIYGYNLRRIQSGA
FSGLFNLKQLRVFFSDSDCSIVVLDTSVFAGLDNLEEIYLKGFRFSNIPNNTFEHLVSLV
KLSLDTVCVEELGEVLCSVPDEMSRLKYLEVFDSGITSIRNRGCPSWPSAVLAGIQVLDL
TQNPIKIIEAGSLAVFQNLSSLSLRFCGVWLGEIWESGVGKLSDIVLSGRVLEEYSTSCK
DMCQLVSNLNLHTLELSYILLDSLSMEDLKDCGIELTVLGIYNSRVQQLDPAFWRSVAGI
QTMVLAKMALTEASFCVSANGTVWNVTTLNLNGNHLTVVKTHQFVCTPLLEQLLLNENAI
TTLEPEAFIGLHHLKILKLSLNKIKMLAADDFRYLRSLEVLLIDENVISSIEDGIFRNQG
ELRELAFGRLEYVYELHLNLLFYGFPKDMQRLSIDADVGTSIFIGSIGRPKGSFRFELNG
YMLYIGDNYPPFLESVRELKLSGHGFYLKNDFFVPYFTHLESLELSADPELVLLDYTGIS
SLRYLKRLKLINLNFSNTTNPGMTLWNLKQLQILVLYNCRLNFLTKMMFKDLHSLELLYL
CSVNPLILQDGMFDVLPVLRAVVLETVNFRCDCETGWFLEWAQNTRAQVINLQKQQCAWR
YQKLNLMSTMEKLCQTDVQYLCYLGTVNIISLLLLSALSYRFAYWPCMVFIFRLRGYMER
NFGKRWWRRRQRNRRDELEAEEDMKYDAFVSFSSHDEVWVLEEFAPKLEEQGQPRLRLCL
HSRDFEVGKGIVDNIAESIYSSRRTVCVLSRRYLRSDWCSLEMRVATHRLLEEQKHRLIL
IFLEHISPFELSTFHRLAKLVKSHTYLDWPQDEAERIHFWERLRRNIADGDMDAP
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgtataaaccagcaactgtgtgttcatctccgtgtctctgcttgagattcatt
ctgtattttagtatgtctagtgttgtcgctgctctcattagtaaacgctgcatgactttc
gatgagcatctcctcaatgacattggtactttgtgctatcatcagcccgggcttggtccc
tatggcgaatgcaaaaacgtagacttccaaaaagatctcttggaggttgagacaggaatc
agatccctttgcatttacagtgattctacagtcattccagccagtgctttctcacacctt
gcaaccttggaacatctggtaatatatggatataatctcaggaggatccagtctggtgcc
ttttccggccttttcaacttgaaacagctgcgtgtttttttcagtgactctgattgcagc
attgttgtcttggacacttctgtgtttgctggattggataatctagaggaaatatactta
aaaggatttcgtttttctaacattcccaataacacatttgagcatctggtcagtttagtt
aaactttctctggacactgtttgtgtggaggaacttggtgaggttttatgcagtgtccca
gatgaaatgtcccgcttgaaatatctagaggtatttgacagtggcatcacttccatcaga
aaccgaggctgtccatcatggccttcagctgtacttgcagggatacaggttttagatctt
actcaaaaccctattaaaataattgaggccggctctctggcagtgtttcagaacctttca
agtctctctctacgtttttgtggtgtatggctgggagaaatttgggagtctggagttgga
aaactgagcgacattgtgttgtctggacgtgtattagaagaatattctacaagctgcaaa
gatatgtgccagctagtttctaacttgaatctccacactctcgaattatcctatatactc
ttagattcactgtcaatggaagatttaaaggattgtggaatagaacttacagtgcttggt
atatataattcaagagtccagcagttggacccagcattctggagaagtgtagcaggaata
cagacaatggttttggccaagatggcattgactgaagcctcattctgtgtttctgccaat
gggactgtttggaatgtaactactctgaatctaaatgggaaccatctaacagtagtcaaa
acacaccagtttgtttgcacccctctactcgagcaactacttcttaatgaaaatgcgatt
acaactctagaacctgaagcattcattggtctgcatcatcttaagattctcaaacttagc
ttgaacaagatcaaaatgcttgctgccgatgactttcggtatcttcgatctctagaagtc
ctgcttattgatgaaaatgtgattagtagtatagaggatgggatctttcgaaaccagggg
gagctgcgtgaacttgcatttggaaggttggagtatgtctatgaattacatctgaacttg
ttgttttatggttttccaaaggacatgcagcgtctcagcattgatgcagatgtcgggact
agtatttttatcggatctattggaagacccaaaggaagcttcaggtttgagttgaatgga
tatatgctctacatcggagacaactatcctccctttttggaatctgtccgagagcttaag
ctgagtggacatggattttatttgaagaatgattttttcgttccttattttacgcatcta
gaatctttagagttgtcagctgatcctgagcttgtgctcctcgattacacgggaatcagc
agtttgcgttatctcaagcgtctcaaactcatcaaccttaatttctcaaacaccaccaat
cctggtatgaccctctggaatctaaaacagctacagatccttgtactctataactgccgt
ctcaatttcctgacaaagatgatgttcaaagacctgcactcactggaactgttgtatctc
tgcagtgtcaacccactaatcttacaggatggaatgtttgatgtcttgccagttctgaga
gctgtggtgcttgaaacagtgaactttcgatgtgactgtgagaccggctggttcctcgaa
tgggcacagaatacacgagcacaggtgatcaatctgcagaagcagcaatgtgcctggcgt
taccagaaactgaatttaatgtccaccatggagaagttatgtcagacagatgtgcagtac
ctgtgttatttgggcactgtcaacatcataagtctgctgctgttaagtgctcttagctat
cgctttgcttactggccttgcatggtcttcatctttcgactccgaggatatatggagagg
aatttcggtaaacgttggtggaggaggaggcaaaggaacagaagggatgaactagaagct
gaagaagacatgaaatatgatgcatttgtgtcattcagtagccatgatgaagtttgggtc
ttggaggagtttgctccaaagctggaggaacaaggccaacccaggctgcgactctgcttg
cacagcagagactttgaggtgggaaagggaattgtcgataacatagcagagagtatctac
agcagccggcgcacggtgtgtgtgcttagtcgtcggtatctgcgaagtgactggtgcagc
ctggaaatgcgagtagcaacacaccgactactggaagaacagaaacatcgtctcattctc
atctttctcgagcacatctccccatttgagctcagcactttccatcgcttggccaagctg
gtgaaatcacacacatatctggactggccacaggatgaggcggagaggatacacttctgg
gaacgtttgagaagaaacattgctgatggggatatggatgctccttaa
DBGET
integrated database retrieval system