Ictalurus punctatus (channel catfish): 108265835
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Entry
108265835 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265835
04121 Ubiquitin system [BR:
ipu04121
]
108265835
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108265835
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
108265835
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108265835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
ANCHR-like_BBOX
SPRY
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_2
Zn_ribbon_FGT1_1
Cep192_D3
Pur_ac_phosph_N
U-box
Motif
Other DBs
NCBI-GeneID:
108265835
NCBI-ProteinID:
XP_053536269
Ensembl:
ENSIPUG00000000211
UniProt:
A0A9F7TKH0
LinkDB
All DBs
Position
5:19552853..19578122
Genome browser
AA seq
730 aa
AA seq
DB search
MSAVSRRSSMGVPIKNIERELICPICKELFTHPLILPCQHSVCHKCVKELLMLNQDDSFG
TDAGSECSNPGSPRSRVPSPSMERLDRLVRSGSVSSSPGWRRSSVTPRVTSFPCPGCQRD
IELGERGISMLFRNFTLESIVERYRQAARAAVAIMCNLCKPPAVQEATKSCMDCKASYCN
ECFKLHHPWGTPRAQHEYVGPTTNFRPKVLMCPEHEMEKVNMYCEVCRRPVCHLCKLGGS
HANHKVTSMSSAYKVLKDKLAKSIHYLISKEEQVKTQISELEVMIRQTEENGQLAERQAN
EHFERLFETLQERKTELLRSIELSRNRRQDKLKSQVDEYQGMLENSGLVGYAQEVLKETD
QSCFVQTAKQLHIRVQKATESLKTFQPAANPSFDEFILDTSKEESLLKDLSFGGVPNPPM
IDLSQSRVYNEGLIHWRLHEDCLPTDHHVLEYRKVPAKDEEESQWHLTERVHGSSTVVCD
LDSDCRYAFRVRSSRNTIHSPYSPEVSFHTPPAPVFGFLFNEKCGYSAERLQLSKRKDSV
ESMAGMVFLLAADRVQTGSYVCLDYIIGDTGISHGRHYWAFHVEPSSYMVKVGVASDAKM
SEWFHNPHDTSSPRYDHDSGHDSGSEDTCYELSQPFTLLTAGMGKLFIPKASHTAAAGDH
GSRVLPLPQRIGICLDYDAGRVFFYDADSMRCLYERRVDCSGTMYPAFGLMGGGAIHLEE
FITAKRLSYM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggtatcaaggcgcagctctatgggggtccctataaagaacatcgagcgtgag
ctgatctgccccatttgcaaggaactgttcacgcacccgctcattctgccttgccagcac
agcgtttgtcacaaatgtgtcaaagagctgctcatgctaaaccaggacgactcgttcggt
acggacgccggatccgagtgctcgaaccctggaagcccgaggtccagagttccctctccc
agcatggagaggctggacaggctggtccgatcagggtccgtgtcatcctcccccggctgg
aggcgctcctcggtcaccccccgtgtcaccagcttcccatgcccaggttgccagcgtgac
atagagctgggcgagcggggcatcagcatgctcttccgaaacttcacgctggagagcatt
gtggagcgctacaggcaggcggcccgtgccgctgtcgccatcatgtgcaacctgtgcaag
ccgcctgctgtgcaggaggccaccaagagctgcatggactgcaaggcgagctactgcaat
gagtgcttcaagctgcaccacccgtgggggacacccagggcccaacacgagtacgttggg
cctactactaacttcagaccaaaggtgttgatgtgtcctgagcatgagatggagaaagtt
aacatgtactgcgaggtgtgtcgccggccagtgtgccacctctgcaaacttggcggttct
catgctaaccataaggtcacgtccatgagcagtgcctacaaggtcctgaaggataagcta
gcaaaaagtatccattacttaattagcaaagaggaacaagtgaagactcagatttctgaa
cttgaggtcatgattcggcagaccgaggaaaatggacaactcgcagagagacaggcgaac
gagcactttgagcgtctatttgagactctgcaggaaaggaagactgaattgttgcggtcc
atcgagctgtccaggaaccggcgtcaggacaagctcaagagccaggtggatgagtaccag
ggcatgctggagaacagcggtttagtgggttacgcacaggaagtcctcaaggagactgac
caatcctgctttgttcagacggctaagcagctccacatcagggttcagaaagccacagag
tcattgaagacctttcagcctgctgctaacccctcgtttgatgagtttatcctggacacc
tcaaaggaagagtccttgctgaaagacctttcctttggtggagttcccaatcctcccatg
attgacctgtctcagagtcgtgtgtataacgagggcctgattcactggaggctgcatgag
gactgtctgcccacagaccaccatgtccttgagtatagaaaagtgcctgcaaaggatgag
gaggagagccagtggcacctgaccgagcgtgtgcacggctccagcacagtggtgtgtgac
ttggatagtgattgccgctacgcgttcagggtgcggagcagccgcaataccattcacagc
ccctacagccctgaggtgtcctttcacacaccacctgcaccagtgttcggcttcctgttc
aatgagaaatgtggctacagtgcagagcgtctgcagttgagcaagaggaaggattctgtg
gaaagcatggctggcatggtcttcctgttggccgctgatcgggtccagactggaagttac
gtatgccttgactacatcatcggtgacacgggcatatcacatggccgccactactgggct
ttccatgtggagcctagctcttacatggtgaaagtgggtgtggcgtcagatgcgaagatg
agcgagtggttccacaacccccatgacaccagcagcccaaggtacgaccatgacagtggg
catgacagcggcagcgaggacacgtgctatgagctctcacagcctttcactctactcaca
gcaggcatgggcaagctctttattcccaaagcgtcccacactgcagccgcaggagaccat
ggcagccgtgttcttcctctgcctcagcgaatcggcatctgccttgactacgatgccggc
cgcgtattcttctacgacgctgactcgatgcgctgcctctacgagcgtcgggtggactgt
tccgggaccatgtaccctgcgttcggcctcatggggggcggagccatccacctggaggag
ttcatcacagccaagcgcctctcttacatgtga
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