Ictalurus punctatus (channel catfish): 108265843
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Entry
108265843 CDS
T04658
Symbol
fgd
Name
(RefSeq) faciogenital dysplasia isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108265843 (fgd)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
PH_9
FYVE_2
PH_13
IQ_SEC7_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
108265843
NCBI-ProteinID:
XP_017324078
Ensembl:
ENSIPUG00000023591
UniProt:
A0A2D0R0A7
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Position
5:complement(8718245..8782722)
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AA seq
912 aa
AA seq
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MRVTRVTSHGKRKQVADGKQTLVDLSSSLVQYSCGSLDLVLKKKTSPLPRSCHKHLVGKP
CHDHSATQRKPTSRRPQVPPKPTHLQALRQDKWPQQIPPAPCRPLPVPPPKPKRLTSPQQ
KHPAKSVCLLIDKFENSRAPILGVQPKSALRLHLRMEAPEPEITEQPQLNKSEVNESGNT
FIMDEIALKKDMELPALDFLRIDCVSDTVSQDKLDQECHSGDLDVNHSDSDDNHNHAEHA
VKDQLHDVGSLIGGPCAGQVNNVTEASGKIPNRDSGIDSPSCGAEGEAFPNEVPIEEEER
NDSIATETESVSCVTTSNKRDSTQDEDSDLDEESSEDPESLEVKGLQSESQKLFNIAQEL
LHTEEAYVKRLNLLDQVFCTKLTEAGIPMDVINGIFSNISSIYRFHHQFLLPELQTRITQ
EWNTTPRIGDILQKLAPFMKMYGEYVKNFDPAMDLVNTWSQRTAFKSVVQNIQKQDVCGN
LTLQHHMLEPVQRIPRYELLLKDYLKKLPSDAPDRKDAEKALDLISTAANHSNAAINKME
KMNKLLEVHERLGGEEDIVNPANDLIKEGHIKKMSAKNGTAQDRYLYLFNNMLLYCVPKL
RLMGQKFSVRERIDIAGMEVQENVKQNLAHTFTIIGKQRSLELQARNAEEKQEWIQVFLA
TIDKQKQKSETFNKAFISSLSRDDEHAPDSPSPWSNASVDSDGGGNERRSSKKRDKEKET
CKGCNETFHFTKRKHHCKNCGAAVCGKCSKVSETKNIRMCKQCFEVQQGPDGTPGGNVEQ
KKKTVVEKQLSLTDDSCVLCSQLLVQEKGKNWIKTWVAITKAEPLMLYLQTAGQDARGTR
AISVPGYEVSILTPSEKSEGKHVFRLSHSQHALLFSAPDEELMDKWVELLSHAAKGVALE
TSLSLAEHRKSR
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgacgagagtaacttctcatggaaaaaggaagcaggtggcagatggcaaacag
accttagttgacctctcatcctcgctcgtacagtattcctgtggatcattggatttggtg
ttgaaaaagaaaacctcacctcttcccagatcatgtcacaaacaccttgttgggaagccc
tgccacgatcactccgctacacagaggaagccaacatcacggagacctcaagtgccccct
aagcccacacatcttcaggctttgcggcaggacaagtggccacagcaaatccctccagca
ccttgtcgccctctcccagtccctcctcccaaacccaaaaggctcacatcaccgcagcag
aaacatcctgccaagagtgtgtgtctcctcattgacaagtttgaaaactccagggcccca
attctgggagtccaacccaaaagtgcactccggttgcacctgaggatggaggctccagag
cctgaaatcacagaacagcctcagcttaataagtcagaggtgaacgagtccgggaacaca
ttcatcatggatgaaattgcacttaaaaaggatatggaattgcctgctttagacttttta
agaatagactgtgtcagtgacacagtcagtcaagacaaacttgaccaagagtgccacagt
ggggatttggacgttaatcacagtgattctgatgataaccacaaccatgcagagcatgca
gttaaagaccaactacatgatgtcggaagtttaataggtggcccatgtgcagggcaggtt
aacaatgtgacagaggcaagcggaaagattccaaatcgtgacagcggaatagacagcccg
tcctgcggagccgagggagaggcatttccaaatgaggtccccattgaagaggaagaaagg
aacgacagcatagccacagaaacagagagtgtgtcatgtgtcaccactagcaataagcgg
gactcaacacaagatgaagatagcgatttggatgaagagagcagcgaagatccagagagc
ctagaagtcaaaggtttgcagtctgagtctcagaagttgttcaatatcgcacaagagctc
ctccatacagaggaagcgtatgtcaaaagactcaacctgctagatcaggtgttctgtacc
aagttgacagaggcagggattcctatggatgtgattaatgggattttctcaaacatctcc
tccatttaccgcttccaccatcagttcctgctgccagagctacagacacgaattactcaa
gagtggaacacaactccacgtataggtgatatcctgcagaagttagctccgttcatgaag
atgtatggggaatatgtcaaaaactttgaccctgcaatggacttggtcaacacatggagc
cagaggaccgctttcaaaagcgtggttcagaatatccagaagcaggatgtatgtggtaac
ttgacactgcagcatcacatgttggagccagtgcagcgtattcctcgttatgagctcctc
ctcaaagattacctgaagaaactgcccagtgatgcgccagataggaaagatgcagagaag
gctctggatttgatctccacagcagcgaaccattctaatgcagccattaacaagatggag
aagatgaataagctactggaggtgcatgaacgattgggtggggaggaagacattgttaat
ccagctaatgaccttatcaaagagggtcatataaagaagatgtctgctaaaaatggcaca
gcccaagaccgatacctctacctgttcaataacatgttgctgtattgtgtgcctaaattg
cgactcatgggacagaagtttagcgtcagagaaaggattgacatagcaggcatggaggtc
caggagaatgtaaagcagaacctggctcacacttttacaatcatcggcaagcagcggtct
ctcgaactgcaggccagaaatgctgaagaaaagcaggaatggatccaggtattcttggcc
acaatagataagcaaaaacagaaaagtgagacatttaataaagccttcattagctcctta
tcccgtgatgatgaacacgcacctgactcaccgagtccatggagtaatgcatctgttgat
tcagatggaggtgggaatgaaaggaggagttcaaagaagcgagacaaggagaaggagact
tgtaagggctgcaacgagacatttcacttcaccaaacgcaagcaccactgcaagaactgc
ggagcggctgtctgtggtaaatgctcaaaagtgtccgagaccaagaatatccgcatgtgt
aagcagtgtttcgaagtccagcaaggacctgatgggacgccagggggcaatgttgagcag
aagaaaaaaacagtcgtagagaagcagctctccttgacagatgatagttgtgtactatgc
agccagctcttggttcaggagaaaggaaagaactggatcaagacctgggtggcaataaca
aaggcagaaccactaatgctttacctacagactgcaggccaggatgcacgtggaacccgg
gcgatctctgtacctggttatgaggtcagcatattaacaccctcagagaagtcagaaggc
aaacatgtgttcaggctcagccactcccagcatgcactgctcttcagtgccccggatgaa
gaattaatggacaagtgggtggagcttctgtcccatgctgcaaaaggggtggctttagag
acgtcgctaagcctggcagaacaccgtaagagccgatga
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