Ictalurus punctatus (channel catfish): 108265880
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Entry
108265880 CDS
T04658
Symbol
rhoab
Name
(RefSeq) rho-related GTP-binding protein RhoA-B
KO
K04513
Ras homolog gene family, member A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04081
Hormone signaling
ipu04144
Endocytosis
ipu04150
mTOR signaling pathway
ipu04270
Vascular smooth muscle contraction
ipu04310
Wnt signaling pathway
ipu04350
TGF-beta signaling pathway
ipu04510
Focal adhesion
ipu04517
IgSF CAM signaling
ipu04519
Cadherin signaling
ipu04520
Adherens junction
ipu04530
Tight junction
ipu04621
NOD-like receptor signaling pathway
ipu04625
C-type lectin receptor signaling pathway
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108265880 (rhoab)
04350 TGF-beta signaling pathway
108265880 (rhoab)
04150 mTOR signaling pathway
108265880 (rhoab)
09133 Signaling molecules and interaction
04081 Hormone signaling
108265880 (rhoab)
04517 IgSF CAM signaling
108265880 (rhoab)
04519 Cadherin signaling
108265880 (rhoab)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108265880 (rhoab)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108265880 (rhoab)
04520 Adherens junction
108265880 (rhoab)
04530 Tight junction
108265880 (rhoab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108265880 (rhoab)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108265880 (rhoab)
04625 C-type lectin receptor signaling pathway
108265880 (rhoab)
09153 Circulatory system
04270 Vascular smooth muscle contraction
108265880 (rhoab)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108265880 (rhoab)
05100 Bacterial invasion of epithelial cells
108265880 (rhoab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265880 (rhoab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108265880 (rhoab)
04031 GTP-binding proteins [BR:
ipu04031
]
108265880 (rhoab)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108265880 (rhoab)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108265880 (rhoab)
Exosomal proteins of other body fluids (saliva and urine)
108265880 (rhoab)
Exosomal proteins of colorectal cancer cells
108265880 (rhoab)
Exosomal proteins of bladder cancer cells
108265880 (rhoab)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rho Family
RhoA/B/C [OT]
108265880 (rhoab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
108265880
NCBI-ProteinID:
XP_017324179
Ensembl:
ENSIPUG00000006392
UniProt:
A0A2D0R0W3
LinkDB
All DBs
Position
5:27189135..27197680
Genome browser
AA seq
193 aa
AA seq
DB search
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKAEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ
ARKGKKNNKCLLL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgattcgtaagaagctggttatcgttggtgatggagcgtgcggtaaaacctgt
ttgctgatcgtcttcagtaaggaccagttccctgaagtctacgtccccaccgtgtttgag
aactatgtagcagacattgaagtggatagcaaacaggtcgagctcgctctttgggatacg
gcagggcaagaggactatgacaggctccgcccactttcctacccagacactgatgtcatt
ctcatgtgcttctctattgacagtccagacagtttagaaaacattccagaaaagtggaca
cctgaggtcaaacacttctgcccaaatgtacccatcatccttgtgggcaacaaaaaagat
ttacgaaatgatgagcacacacgcagagagctggccaagatgaaacaggagccagtcaaa
gctgaagaaggacgggacatggctaatcggatcggagcttttggctacatggaatgctct
gcgaagacgaaggatggtgtgcgggaggtgtttgagatggccaccagggccgcgctgcag
gcccgcaagggcaaaaagaacaacaaatgccttctcctctga
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