Ictalurus punctatus (channel catfish): 108265893
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Entry
108265893 CDS
T04658
Name
(RefSeq) coiled-coil domain-containing protein 22 isoform X1
KO
K23343
coiled-coil domain-containing protein 22
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265893
04121 Ubiquitin system [BR:
ipu04121
]
108265893
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
Others
108265893
Protein recycling
CCC complex
108265893
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
108265893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
DUF8567
PUMA_CC
LAMB4
LYRM2-like
Motif
Other DBs
NCBI-GeneID:
108265893
NCBI-ProteinID:
XP_017324208
Ensembl:
ENSIPUG00000000650
UniProt:
A0A2D0R0P3
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Position
5:21631794..21654677
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AA seq
639 aa
AA seq
DB search
MEEVDRILIHSLRQAGTDIDEDVQRVKQFSSELIVQAVVRCLRVIDPGVGSGLSPTLPPG
MSARFRVGMSLAQACQDLGYKGEIGYQTFLYSNEPEIRSLLMFLVEKLPRESAEVSDQPA
GKSALLQKAIAAQIKAQLALPWLPPFCRLPLHRKTQSPGPCHNFRAQPLSLPYSLKGPAK
KQSKEVKEYWREYLLPVTSQPSQATSVPASLLENHVSELSAAQDWENEWNSQGLLSRLTP
EDYRSRKRMRLQKRIEEQLRAAAQPRPDTHNATRSTSDLSELLNSFAGATAGGDVLTKGT
RFTHSEKFTFTQEPEKAAQQMAAAASALPSSHQSEEDLKAQQEAELSAIQQQLQQLSVQM
EEVGGDIRQLTVSIHQVSDELKQREVRNSEKESNIRVKKQTIDLLPDAENNLIKLQSLVE
ASSKRVVHLASQWEKHRTPLIDEHRRLKELCSNREMESSRKLSEIKDLHDKIRQSAEEAK
KKESLYKQLITEYETLPKDVSRSAYTMRILEIVGNIKKQKEEITKILSDTKDLQKEINGL
TGKLDRTFAVTDELVFKDAKKDESVRKSYKYLAALHENCTQLIQTIEDTGSIMREIRDLE
EQIETENGKKTVSNLEKILEDYKAIRQENSALAAKIREG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttgacaggattttaatccactctctaagacaggctggcactgatatagat
gaagatgtgcagagggttaagcagttctccagtgagctcatagtgcaggcggtggtacga
tgcttgcgtgtgattgacccgggtgtgggcagtggactctctcccacgctgccgcctggt
atgtctgcccgcttcagggtgggcatgagcctggcccaagcctgccaggacttgggctat
aagggagaaattggctaccagacgtttctatacagtaatgagccagagatccgctcttta
ctcatgttcctggtggagaagctgcccagagagagtgcagaggtttctgaccaaccagca
gggaagtctgctctcctgcagaaagccatagcagcccagattaaagctcagttggcattg
ccttggctccctccattctgcagactgcccctgcaccgcaaaacccagagtcctggtcca
tgtcacaatttccgtgcccagccactgagtctcccatactcactgaaaggtcctgccaag
aaacagtctaaagaagtgaaagagtattggagggagtatttgctgcctgtaacatctcag
ccttctcaagccacttcagtgcctgcctctctgttggagaaccatgtttcagaactaagt
gcagcacaggattgggagaacgagtggaacagccaaggccttctctccagactcactcct
gaggactatcgctcgaggaaaagaatgcggctgcagaagcgaatagaggagcagctgagg
gcggctgcccagcctcggcccgacacacacaacgccacacgttcgacctctgacctttct
gagctcttaaactccttcgctggggctacagcaggaggagatgtcttgaccaaaggcaca
cgcttcacccactctgagaaattcaccttcacacaggaacctgagaaagccgctcagcag
atggcagcagcagcaagtgcacttcccagctcccaccaatcagaggaggacctaaaggcc
cagcaggaggcagaactctctgcaatccagcagcaactacagcagctttctgtccaaatg
gaggaggtgggcggagacataaggcagctcacagtgtccattcaccaggtgtcagatgag
ctgaaacagagagaggtacgtaattcggagaaggaaagcaacatcagggttaaaaaacag
accatcgacctcctaccagatgccgagaacaacctgatcaaattacagagcctggtggag
gcaagctctaagcgagtggttcacttggcctctcagtgggagaaacacagaacaccactt
attgatgaacaccgtcgactcaaagaactctgcagtaatcgagaaatggagtcctccaga
aagttatctgaaatcaaagaccttcatgataaaatccgacagtctgctgaagaggccaaa
aagaaggagagcctatataaacagctgatcacagagtacgagactttgcctaaagatgtc
tcccgctcagcctacactatgaggatcctagaaattgtcggcaacattaagaaacagaag
gaggaaatcacaaagattttgtcggacactaaagatctgcagaaagagattaacggactt
acaggaaagcttgacagaacatttgctgtaacagatgaactggtttttaaggatgccaag
aaagatgaatctgttcgtaaatcttataaatacctggctgccttacatgagaactgcacc
cagcttattcagactattgaggacacaggcagcattatgagagagatcagagatctggag
gaacagattgagactgaaaatggtaaaaagactgttagcaacctggagaagattctggaa
gactacaaggctattcgacaagaaaactctgccctagcggctaagataagagaaggttaa
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