Ictalurus punctatus (channel catfish): 108265894
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Entry
108265894 CDS
T04658
Symbol
tubb2b
Name
(RefSeq) tubulin beta-2b chain
KO
K07375
tubulin beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108265894 (tubb2b)
09144 Cellular community - eukaryotes
04540 Gap junction
108265894 (tubb2b)
09142 Cell motility
04814 Motor proteins
108265894 (tubb2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108265894 (tubb2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108265894 (tubb2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108265894 (tubb2b)
04147 Exosome [BR:
ipu04147
]
108265894 (tubb2b)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108265894 (tubb2b)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108265894 (tubb2b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108265894 (tubb2b)
Exosomal proteins of colorectal cancer cells
108265894 (tubb2b)
Exosomal proteins of bladder cancer cells
108265894 (tubb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
108265894
NCBI-ProteinID:
XP_017324210
Ensembl:
ENSIPUG00000006117
UniProt:
W5UL31
LinkDB
All DBs
Position
5:3708337..3827154
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMTTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtgcatcttcaggctggtcagtgcggtaaccagatcggagccaagttc
tgggaggttattagtgatgagcatggtatcgacccaactggcacctaccatggagacagt
gatctccagctggacaggatcaacgtctactacaatgaggcatcaggtggtaaatatgtg
ccccgtgctgtgctggtcgacttggagcctggtaccatggactccgtgaggtctggacct
tttggtcagatcttcagacctgacaactttgtttttggtcagagtggtgctggaaacaac
tgggccaagggccactacactgagggagctgagcttgttgactctgtgttggatgtggtg
cgtaaggaggctgagagctgtgactgcctgcagggcttccagctcacccactccctgggt
ggaggtactggctcaggcatgggcacactgctcatcagcaagatccgtgaagaatatccc
gaccgtatcatgaccacgttcagcgtggtgccgtctcccaaagtgtccgacactgtcgta
gagccctacaacgccacgttgtctgtgcaccagctggtcgaaaacacagatgagaccttt
tgcatcgacaacgaagctctctatgatatctgcttccgcacgctgaagctcacgacaccc
tcatatggtgacctcaaccacctcgtgtctgccaccatgagcggtgtcactacctgtctc
cgtttccctggccagctcaatgcagatttgcgcaaactggctgtcaacatggtgcccttc
ccacgtctgcatttcttcatgcctggttttgccccactgaccagcaggggaagccagcag
taccgctcactcacggtacccgagctgacacagcagatgttcgactccaagaacatgatg
gccgcctgcgacccacgccatggccgctacctcaccgtcgctgccatcttccgtggccgc
atgtccatgaaggaagttgacgagcagatgctgaacgtgcagaacaagaacagcagctac
ttcgtcgagtggatccccaacaatgtcaagaccgccgtatgcgacatcccaccacgtggc
ctcaagatggctgccaccttcatcggcaacagcacggccatccaggagctcttcaagcga
atctctgagcagtttactgccatgttcaggcgcaaagctttcctgcactggtacaccggc
gagggtatggatgagatggagttcaccgaagccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaagacgccacggctgaggaagaaggggagtttgaagaggaaggg
gaggaggagcttgcgtaa
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integrated database retrieval system
