Ictalurus punctatus (channel catfish): 108265900
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Entry
108265900 CDS
T04658
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X3
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108265900 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108265900 (rapgef1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
108265900
NCBI-ProteinID:
XP_017324224
Ensembl:
ENSIPUG00000009563
UniProt:
A0A2D0R111
LinkDB
All DBs
Position
5:complement(28597306..28633920)
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AA seq
1061 aa
AA seq
DB search
MSGKLDSKQDSQRSNLQTFTMRLIDRFHSPKPKRVHSSKKASKPSIERTVKAPEKQETKN
LSRLEEKEKEVVSALRYFKTIIDKMVVDRKVLEMLPGSASKVLEAIVPVVQIDPKILKSS
SVSSCLSRVYQSLANLIRWSDQVMLEGVDLEEKDTVANVTSIIKAVLDGVKELVKLVLEK
QQLPSPTSPTAKNVPSVISSESAPEPPVIETEDESSTNSSALSRSSEALTDAPSTEEAAP
PKPPLPGLKVPEHCPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPIGICKQDYDADG
LQRRFSGGSHSYGGESPRSSPCGSMGKLSKSDEQLSSLEQDSGQCSRNTSCETLDTAECY
DPDYDFLREDLSSVDQISLPPGSCLSPLPESHREPSSSPCPGQVPCGSASLHHSTAPSPH
TLITPPALPEKKRRSGNSHTPFDGLPSRTPFERLHSHYDNVADEEIPVPPFPLFPLFAPV
VGYGVDFVAPENASVPQSPPPLPEKKSRHILKYMQFMEDYSEPQPSVFYQTPQSESIYEQ
RNRLIQEVYGFNDSFSSSDSVHEPLPPPALPPKQRQLSQNASDESGEGGYVNLYSSSQAN
GDLPLSNGDPNSGAEDSLQDSVSDHSKEPTDSDSWKQKCADSDLSSEELDELSLVDHNEI
MAHITLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFLTPEDLIKKL
HYRYTRFSHSSDTVKKRVSKNTFFVLVRVVDELCLVELTEDILKHLMDLVVSLVCSGELS
LARVLRKNVLDKVEQKKLLSYTNSMKTLAARSVAARPGTLHDFRSHEIADQLTLLDAELF
YKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLIILQEKAQDREKLLLKFIKI
MKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAD
VEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNFSKRWQQFNILDSMRRFQQVHYDLKHND
DIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaaactcgacagtaagcaagactcccagcgctccaacctgcaaaccttcaca
atgaggctaatagacagatttcactcccccaagccaaaaagagtgcattcatcaaagaaa
gcatcaaagccttcaatagaacgaactgtcaaggctcctgagaagcaagaaactaagaat
ctcagtcggttggaagagaaggagaaagaagtggtcagtgccttgcgttacttcaagacg
atcattgataagatggtggtggaccggaaagttctggaaatgcttcccggctcggccagt
aaagtgttggaggctatcgtgcctgtagtgcaaatcgaccccaagattctgaaaagttcc
tccgtgtcgtcctgcctcagtcgagtgtatcagagtctggcgaacctcatccgctggtct
gatcaggtgatgctggagggagtggacctggaggagaaggacactgttgcaaatgttacc
agcatcatcaaagcagtgctggatggggtgaaggaactagtgaagctggttttggagaaa
cagcagctcccatccccaacatcgcccacagccaaaaatgtgccatcagtcatcagctca
gagagtgctccagagcctcctgttatagagacagaagatgagagctcgacaaactcgtct
gcactgagtcgttcctccgaggccctgactgacgccccctccaccgaagaagcagcgcct
cccaaacccccgctccctggcctgaaagtgcctgagcactgtcccccagctcttcctcct
aagaagcgccagtcagctccgtctcctacccgagtcgccgtcgttgctccgatgagccgt
gccaccagcggatcgagtcttcctatcggcatctgcaaacaggactatgatgcagatggt
ttacagcggcgcttttctggtggcagtcactcatacggtggcgagtcgccgcgcagctct
ccctgcggcagcatgggtaaactgagcaaatcagacgagcagctgtcctctctggagcag
gacagcggacagtgctctcgcaacactagctgtgagacgctagatacagcagagtgctac
gacccagactatgacttcctcagagaggacttgtccagcgtggatcagatctctctgcct
cccggaagctgtctcagccccctacccgagtcccaccgtgagccgtcctcctccccatgt
ccgggccaggttccgtgcggttctgcctctcttcatcactccaccgctccttctccgcac
accctcatcacccctcctgccctgccagaaaagaagcggcgcagcggcaactctcacaca
cccttcgacggcctgccgtctcgaacccccttcgagcgcctgcactcccattacgacaac
gtcgcagacgaggaaatacccgtgccaccgttccctctgttccctctcttcgcccccgtg
gtcggatatggggtggactttgtcgcccctgagaacgcttccgtgcctcaatctcctcca
ccgctacccgagaagaaaagcagacacatcctgaagtacatgcagtttatggaggattac
tcggaaccgcagccatccgtgttctaccagacgccgcagagcgagagcatctacgagcag
cgcaataggctcatacaggaagtgtacggcttcaacgactcgttcagcagcagtgactct
gtgcacgagcccctcccccctccagcgctcccacccaaacagaggcagctgagccagaat
gctagtgacgagagtggcgagggtgggtacgtcaatctgtattcatccagccaagccaac
ggagacctgccgctctcgaacggtgaccccaacagtggcgcggaggactcgctccaggac
tcggtctcggaccacagcaaggagccgactgactcggacagctggaagcagaagtgtgca
gactcggacctgagctcggaggagctggacgagctgtccctggtggatcataatgagatc
atggctcacatcacactaaagcaagagaacgatgacggaccagacgtccgggcaggatca
ggggacattttattagttcacgcaacagaaacggatcgcaaagatctggttttatactgt
gaagccttcctgacgacgtacaggacatttctaaccccagaggacctcattaagaagctc
cactataggtatactagattttctcacagttccgacaccgttaagaagcgagtcagcaaa
aacaccttcttcgtgctggtgcgtgttgtggacgagctttgtttggtggaactgacagaa
gatattctgaagcacctgatggacctggtggtcagtctggtttgtagcggggagctcagt
ctggcccgcgtcctccgtaagaacgttctggataaagtggagcagaagaagctgctgagc
tacactaactcgatgaagactctagctgcccgcagtgtcgccgccaggcctggtactctt
catgacttccgtagccatgagatcgctgatcagctcactctcctggacgcagagctgttc
tacaaaatagagatccctgaagttctgctgtgggcaaaagaacagaatgaagagaagagc
ccgaatctcacccagttcacagaacacttcaataacatgtcttactgggtgcgttcttta
ataatcctgcaagaaaaagcccaagaccgagaaaaactcctcctcaagtttatcaaaatc
atgaagcacttacgaaaacttaataactttaactcctacttggcgatactgtcggctctg
gattcagcacctataaggagactggagtggcagaagcaaacctcagagggtctggaggaa
tactgcactttaatcgatagctcgtcatcgttccgggcgtacagagcagccttggcagac
gtcgagcctccctgtataccttacctgggtctcatccttcaggacttaacctttgtgcac
cttgggaatcctgacttcatcgaagggaaggtgaacttttcgaaacgctggcagcagttc
aacatcctggacagcatgcggcgcttccagcaagtacattacgatctcaaacacaacgat
gacatcgtatccttcttcaacgacttcagtgaccatctcgcagaggaggcgctgtgggag
ctctctctcaagatcaagccacggaacatcacgcgccgcaaaacagagcgggaggaaaag
acgtag
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