Ictalurus punctatus (channel catfish): 108265923
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Entry
108265923 CDS
T04658
Name
(RefSeq) RING finger protein 37 isoform X1
KO
K10600
U-box domain-containing protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108265923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108265923
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
U-box type E3
108265923
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GFIT
Motif
Pfam:
DUF5918
U-box
zf-RING_5
zf-RING_UBOX
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
108265923
NCBI-ProteinID:
XP_017324261
Ensembl:
ENSIPUG00000025058
UniProt:
A0A2D0R2I6
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Position
5:18141611..18154834
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AA seq
584 aa
AA seq
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MEKTPLRNTLENETPEPSGSSVGKLLDGVSMVVNLCLPHFKTTAHCNKLCADGCEVSNLL
SGDPAALRRGCRLEYFLRPPLHVTLHFQVRVELYRVDVELLPCGSASRRLEILTCSEVKP
DKSSGNDNERGQFKLVGCCELKEEVLTCFKHPNFKLRAPFPECPPDPPAHAKQQELWSRG
GQSLSSVAQLRITVPYAGASSVLGIKSLAVWGVPARCCSLSELEQFKKAHFDNMQPKLSS
FSIISPVPTSDRSHGLDNASSETTIPEEFLDPLTRELMVLPMILPSGMVVDNSTLEEYQK
QEAVWGRMPNDPFTGVPFTKDSKPIPNPLLKCRIDSLLLQTGHTGIRSKNSLLSKPQPSR
LICASVSQTDLLGVQSLRAETQTQQVYSVRTECTEMLQKHTINEEKNHSGQTKSHSRSSE
NIQGLILGTSAGTCSIRKETFGQSNKRKPQSNFSSTSKHLLSPLTKMPRTDASITLPTET
NSHEERLSQSLDQALSSALHGLPTYTSQSNPEPDTTGGQGRCGSCSCSLTIYSPSPVAYS
LPCGHLLCRQCLQHEHTPRSQRLPIICPTCQAHALSSTIMRVHH
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacacctctgagaaatacattggagaatgaaacgcctgagccaagtgggtcc
agtgtgggcaagctcctggatggggtaagcatggtggtcaacctctgcctgccacacttt
aaaaccactgctcactgcaataagctatgtgcggatggctgcgaagtttcaaatcttctg
tctggggacccagcagctttgcggcgaggttgcaggctagagtacttcctccgtccacca
ctacatgtgaccctgcacttccaagtgagggtcgagttataccgtgtggatgttgaactt
ttgccctgtggtagtgcctctaggaggcttgagattcttacctgctctgaggtaaaacct
gataaaagctcaggaaatgataatgagagaggacagtttaagcttgtgggatgctgtgag
ctgaaagaggaagtgctcacatgttttaagcatccaaattttaaactccgagctcccttt
cctgagtgcccacccgaccctccagcacatgcaaagcagcaggagctctggagccgggga
ggtcagtcactaagctcagtggcccaacttcgtatcactgtcccctatgctggggcttct
tcggtactgggaatcaaatccttggcagtatggggtgttcctgctcgctgctgttctctt
tcagaactggaacaatttaagaaggcccattttgacaacatgcaaccaaagctttctagt
ttttcgattatttcaccagttcctacctcagacagatctcatgggctagacaatgcttcc
tcagaaacaactatacctgaggagtttctggaccctctgactcgggagcttatggttctg
cccatgatcttgcccagcgggatggttgtggacaatagcaccttggaggagtaccaaaaa
caggaagctgtttggggacggatgcctaatgatcccttcactggtgttccttttacgaaa
gactcgaaaccaattcctaaccctctccttaagtgccgcattgatagcctgctgttacag
actggccacacaggaatcagaagcaagaacagtctactgagcaaacctcaaccatccaga
ctcatctgtgcatcagtgtctcaaactgacttacttggtgttcagagcttgcgagctgag
acacagactcagcaggtttactcagtgagaactgagtgcacagagatgctacaaaaacac
actatcaatgaggaaaaaaatcatagtggacaaactaagagtcattccagaagttctgaa
aatattcaaggacttatactgggcacttctgctggaacctgcagtattagaaaggagacc
ttcggacagtcaaataaaaggaaacctcagtcaaacttttcttcaactagtaaacatttg
ttgtctcccttgacgaaaatgccaagaacagatgcaagcatcaccctccccacagaaaca
aactctcatgaagagcgtctgtctcagagtttagaccaggcattaagttctgctctgcat
ggtttaccaacatatacctcacaaagcaacccggagccagacactacaggaggtcagggc
agatgtgggtcatgttcttgttccttgactatttactctccaagccctgtggcttactct
cttccctgtgggcacctgctgtgccgtcaatgtctgcagcatgaacacactccgaggtca
cagagactgccaattatctgtcctacatgtcaagcacatgccttatccagcacaatcatg
agggtgcaccattaa
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