Ictalurus punctatus (channel catfish): 108265934
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Entry
108265934 CDS
T04658
Symbol
stx2b
Name
(RefSeq) syntaxin-2 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108265934 (stx2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108265934 (stx2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108265934 (stx2b)
Membrane trafficking [BR:
ipu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108265934 (stx2b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108265934 (stx2b)
Exosomal proteins of other body fluids (saliva and urine)
108265934 (stx2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF6262
Syntaxin_2
Spectrin_Anc-1
Tlp
T2SSF
EcoEI_R_C
TMEM120A-B
DUF16
SPACA6_N
Lzipper-MIP1
DUF2116
DUF3040
DUF8567
Motif
Other DBs
NCBI-GeneID:
108265934
NCBI-ProteinID:
XP_017324292
Ensembl:
ENSIPUG00000004281
UniProt:
A0A2D0R0X2
LinkDB
All DBs
Position
5:2880183..2894224
Genome browser
AA seq
310 aa
AA seq
DB search
MHARRGEFCALGRPSDEEDGSVAVLVDRGGFMEGFFRKVEEVRSIVDKISSQVNEVKKKH
SMILSAPNPDERTKEELEQLTVEIKKNANVVRTKLKSMQQNLPPEDQANRASVDERIQRT
QYSVLSRKFVEVMTEYNDTQVSFRERSKGRIQRQLEITGKRTTNEELEDMLESGNPSIFT
SDIILNSQITRQALNEIESRHRDIIRLESSIKELHDMFVDMAMLVETQGEMIDNIENNVR
NAVEYVGKANEEVKKAVRYQKSARRKYIILAVILLVIIGVLALIIGLSVGLSSKSTITPA
SSITTSTNPA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctcgaagaggagagttttgtgctctggggaggcccagcgatgaggaagatggc
agcgtcgcggttcttgtggatcgaggcggctttatggagggctttttcagaaaggtggag
gaggtcaggagcatcgttgataagatctcctcgcaggtgaacgaggtgaagaagaagcac
agcatgatcctctcagctcccaaccctgatgaaaggaccaaagaggagctcgagcagctg
acggtcgaaatcaagaaaaatgccaatgtggtgcggaccaaactcaaatctatgcagcag
aacttgcctcccgaagaccaagccaaccgtgcctcagtggacgagcgcatccagagaacg
cagtattcagtcttgtctcggaagtttgtggaggtcatgactgagtacaacgacacgcag
gtctccttcagagagcggagcaagggcaggatccagagacagctggagatcactggaaag
aggaccaccaatgaggaactggaggacatgctggagagcgggaacccctccatttttacc
tcggatatcatcttgaactcgcagatcacgcggcaggcgctgaacgagatcgagtcacgg
cacagagacatcatccgcctcgagtccagcatcaaagagctccacgacatgttcgtggac
atggctatgctcgtcgagacgcagggtgagatgatcgacaacatagagaacaacgtgagg
aacgccgtggagtatgtaggcaaagctaatgaggaggtgaagaaagctgtgaggtaccag
aagagcgcccgccggaaatacatcattctggctgtgatcctgctggtgataatcggtgtc
ctcgcgctaatcatcggcctttccgtgggcctgtcgtccaaatcgactataacccccgcc
tcctccattactacatcaactaatcccgcttaa
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