Ictalurus punctatus (channel catfish): 108266007
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Entry
108266007 CDS
T04658
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M160
KO
K06545
CD163 antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108266007
CD molecules [BR:
ipu04090
]
Proteins
108266007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
TFIIIA_zf-C2H2
Motif
Other DBs
NCBI-GeneID:
108266007
NCBI-ProteinID:
XP_017324421
Ensembl:
ENSIPUG00000011105
UniProt:
A0A2D0R2Y7
LinkDB
All DBs
Position
5:complement(30098932..30127949)
Genome browser
AA seq
1356 aa
AA seq
DB search
MWFLLIYVQLTAIQAQDRIVLRGEKSPCVGRLEVYHNGEWGLVGHHQWRPVNGEVVCKSL
GCGAHVTSGILSQTDIHLSPLAIFWMDEVKCVGTENRLWECPFNGWKISQCHHHNYVSVN
CSGTISLSLNLFGLTDECAGVVQFTTPNGIISLCKQNWDDDKENTKANMVCQELNCGKYQ
KTLKSITFDANGSSYKVPLTCIGNETVSWQCVDWVSAKSNTCQEEISIICSNHERVRLRG
GADVCEGTLEKENSTEGKWSNVSCQEGNNMLHKMCTKLRCGGAVRVDCNESQNTWLKCSD
RVKIDLRKGEEKPSVCYGDIYVSVNGSYQEMCFDATTSKETISKVVCRELQCGAPLYVSQ
GSVKQGTGTNIRHVECHGEEKSLWECIHNNGTFGSCQSINIICSGSLDMRLSNGLDKCAG
QLEVKSQDSWNSMSSVGWSKENTKMVCQHLECRESEDNNHHRFVKSKLPLLKWKLECNGS
DISQCSMTSAKHGQQDPVVSITCKNPELWFLQGNSTCEGRVKSESDAYLPDITHERAAEV
CTQNLCGGVLFTKHDNSSMDSSVCPENATSPFNCFMKNTNTSTKPQFAYVKCSGSREVRL
ENRCYGKVLVCSDENCGVCQDTWTEEQSIMLCNILGCGKVITEKYSGKKKPGVTVASVHC
SKAAKNFSQCNFVQLKDTSLCQNPAYVSCTESLKAVLQDPRDKCAGNLKLFYSGAWYPLC
TNSIDKNTQNAICEYLSCGEALSFNESISSTSNIHGLKKFTCHDGGISNCDVSQTEIGQC
KVGHLKCKGWRRLLLIDPENACSGELKLQNDTGIYAVSSDGWSKRESNELCKYLECGNMS
EMNVKQVKMPFWGRSYSCTGNHISIWDCEKEEALVKNHHLKQLYISCTDKPQVTLSGNCT
GEVRIKNERMCYNSQTMEQLFHELCQQLGCSMFFKTWSTKYKGNARYLSCTGKESNLWQC
SSWTDNCEEVLSLTCTEALKFNFSRPCGGEFLVDYRGQWDPVCPLENMINADRICRERKC
GNALKKSEGSIGNRSNTDITIKCGNEHNYLKHCIKSGRETCTKTAQIYCDKAIKFDFSRP
CGDEFLVDYRGQWEPVCPLENMIDADRICRERHCGNARTKSEGSIGNRSNTDITIKCGND
DNYLKHCVKSGREPCTKTAQIYCDSYFRQTPPPPNTGLIVGLVAGFVLLLVAALIVFWKR
KSFLAILRLKSSEATDVEVSENEMQTLNEKALGVLERGKSDDVVTTVNPMEDSLSQESDS
EHDEENTSTSGSSSGTEYDEVDAGNVKLPEDRGPTEPLLPPRPDNLPDEVTFEAEVEPQE
DYDDVILLTEKRESFIFPGPSSDLPLPGSNDEAKPQ
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcctgctcatatatgtccaacttacagcaatacaagcgcaagatcgaatagtt
ttacggggggaaaaaagcccatgtgtgggccgtctggaggtgtaccacaatggcgagtgg
ggcttggtgggccatcatcagtggagacccgtaaatggtgaagtagtgtgtaagtcgtta
ggctgcggtgctcatgtgacatctgggattttatctcaaaccgacatacacctttctcca
cttgcaatcttttggatggatgaggtcaagtgtgtggggacagagaacaggctctgggag
tgccccttcaacggctggaagatcagtcaatgccaccatcacaactatgtttcggttaat
tgctcagggactatttctctgagtttgaatctatttggattgacggatgagtgtgccggg
gtggtccagttcacaacaccgaatggcataattagtttgtgcaagcagaactgggatgat
gacaaagaaaatacgaaagcaaatatggtgtgccaagaacttaattgtgggaaatatcag
aagacactcaagtccatcacctttgatgcaaatggaagttcatacaaagtgcccctaacc
tgtattggcaatgaaacggtctcatggcagtgtgtggactgggtatctgccaagtcaaac
acatgccaagaagaaatcagcatcatctgctcaaatcatgaacgtgtccgtctgcgcggt
ggtgctgatgtctgtgaaggaactttggagaaggagaacagcactgaaggaaagtggtct
aatgtgtcatgtcaagagggtaataacatgcttcataagatgtgtactaagctgaggtgt
ggcggagctgtcagggtggattgcaatgaaagccagaacacctggcttaaatgctcagat
cgtgtcaaaatagatttaagaaaaggtgaggaaaagccatcagtatgttatggggacatc
tacgtaagcgtgaatggctcataccaggaaatgtgctttgatgccaccacttctaaagag
acgattagcaaggtggtgtgccgggagttgcaatgtggagcccccctctacgtgtcgcag
ggctccgtaaaacaggggaccgggaccaatattagacatgttgaatgtcacggagaggag
aaatctctgtgggagtgcatacacaataatggcacttttggcagttgtcaatccatcaat
attatatgttcaggctctctggacatgcgtctgagcaacggtctggacaagtgcgcaggc
caactggaggtgaaatcacaggattcctggaatagcatgagcagtgtaggctggtcgaag
gaaaatacaaaaatggtgtgtcaacaccttgaatgcagagaatcagaggataacaatcat
catcgttttgtcaagagcaaattgcctctactgaaatggaaactggaatgcaatggctct
gacatctcgcagtgtagcatgacatctgcgaaacatggtcaacaggatccagttgtcagc
atcacctgcaagaatcctgagctctggtttctgcagggcaactcaacgtgtgaagggaga
gtaaagagtgaatctgatgcatacttgccagatatcacccatgaaagggctgcagaagtg
tgtacacagaatctctgtggaggtgtgctcttcacaaaacatgacaacagcagcatggac
tcctctgtttgccctgaaaacgcaacctcacccttcaactgcttcatgaagaatacaaac
acatcaacaaaaccccaatttgcctacgtgaaatgctcaggctccagggaggtgcggttg
gagaacaggtgctatgggaaagtgctggtgtgttcagatgaaaactgtggggtgtgtcag
gacacctggacggaagagcagtcaataatgctctgtaacatcctgggctgtggaaaagtg
attacagaaaagtacagtggaaagaaaaagcctggagtgaccgtggccagtgtacactgc
tctaaagcagctaagaacttcagccagtgcaactttgtacaacttaaagacacttcctta
tgccaaaatccagcctatgtttcctgcacagagagtttgaaagctgtgctgcaggacccg
agagacaagtgtgctggaaaccttaagttattttactctggagcatggtacccactgtgt
acaaacagcattgataaaaatacacagaatgccatctgtgaatacttgagctgtggagaa
gccctcagtttcaacgagtctatcagcagcacgtctaacatccatggactgaaaaaattc
acttgtcatgatggcggcatttccaactgtgacgtttctcaaactgaaataggacaatgc
aaagttggccatctcaaatgcaaaggttggagaaggctgctcctcattgaccctgaaaac
gcctgcagtggtgaactcaaactccagaatgatacaggcatctatgcagtgagcagtgat
ggttggagcaaacgggaaagtaatgaactgtgtaaatatctggagtgtgggaacatgtct
gaaatgaatgtaaaacaggtgaagatgcctttctggggcaggagctacagttgcacaggg
aaccacatcagcatctgggactgtgagaaggaagaggcactggtgaagaatcatcatctc
aagcagctgtacatcagctgtacggacaagcctcaagtgacactcagtggcaactgtaca
ggtgaggtgcggattaagaacgagcgtatgtgctacaactcgcagacgatggaacagttg
ttccatgagttatgtcagcagttgggctgcagcatgtttttcaaaacctggtccaccaag
tacaagggtaatgcacgttacctgagttgcacaggaaaggaaagcaacctgtggcagtgc
agctcatggacagataattgcgaggaggtcctctcgctgacgtgtacagaggcgcttaaa
ttcaatttcagcaggccttgtggaggcgagtttctagtggactaccgcggacaatgggac
cccgtctgtcctctggagaacatgatcaatgcagataggatatgtagggagcggaaatgt
ggaaacgccctcaaaaaatcagaaggatcgataggaaatagatcaaatacagatattaca
attaagtgtggaaatgagcataattatctaaagcactgcatcaaatcaggaagagaaacc
tgcacgaagacggcacaaatttattgtgacaaggcgattaaattcgatttcagcaggcct
tgtggagacgagtttctagtggactaccgcggacaatgggaacccgtctgtcctctggag
aacatgatcgatgcagataggatatgtagggagcggcattgtggaaatgccagaacaaaa
tcagaaggatcgataggaaatagatcaaatacagatattacaattaagtgtggaaatgac
gataattatctaaagcactgcgtcaaatcaggaagagaaccctgcacgaagacggcacaa
atttattgtgacagttattttagacagactcctccaccaccaaacactggacttattgta
gggcttgtggctggattcgtgctgctgctggtggctgcactgattgtgttctggaagaga
aaatctttcctcgccatattaagattaaagtcttctgaagccactgatgtggaggtcagc
gagaatgaaatgcagactttgaatgaaaaagcattaggtgtgcttgaaagaggtaaaagt
gatgacgttgttaccactgtgaatcccatggaggatagccttagtcaagaaagtgattct
gaacatgacgaggagaatacgagcacaagcggaagctcctctgggactgaatatgatgaa
gtggatgcaggaaatgtcaaactaccagaagacaggggccccactgagccactccttcca
cccagacctgacaatttacctgatgaagtgacattcgaagctgaagtggagccgcaggag
gactatgacgatgttatattactcactgagaaaagagaaagcttcattttccctggccca
tcatcagatctaccattaccgggctctaatgatgaggccaaacctcagtaa
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