Ictalurus punctatus (channel catfish): 108266020
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Entry
108266020 CDS
T04658
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108266020 (mindy4)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108266020 (mindy4)
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
108266020 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Rh5
Motif
Other DBs
NCBI-GeneID:
108266020
NCBI-ProteinID:
XP_017324445
Ensembl:
ENSIPUG00000016021
UniProt:
A0A2D0R3R4
LinkDB
All DBs
Position
5:33447401..33460991
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AA seq
672 aa
AA seq
DB search
MGRDVEEVAAAVVREYLSRKGLKKTIACMDEEFPRTNSSINNRSELCRVLHLESLYKKNK
SEDRPLKTMLEIMTKERMKKAGDVKKRPVEGDGSAERTASKPGSDSAADEDRVTRGRDLA
QPHTDEMRSSETSAVSRLGSSSPPEIEGNLNAMSPTAGPGSEQTLGGGDGQTSRGSRMRR
GIMAGPIAASSQQENARRRGPVRKTAASPSLLPKNEEEDSSGRNRRNWSSSTTGASHTGS
DELNALERESTPSIRQTGQSDRTPRLRAHRNDSAPSPRPDALHMAGLVLDDVDDREVSTG
LPAVPIDILSRHRVWNKRPMDQKTAIALKEIIFGSPAACFSEEWRCQSFSFSSRPALRYG
IVQKKGGPCGVLAAVQAAVLQKLLFGGTSTDALSERLSDATRTKCLTDAVAGILWRAADR
KNVTVAINSGRSQFTPMGHYRSDGVLDMITCVDVQSFDDLKLLIEQHVHQFESGPFGCVL
LIVSAVLSRTIHTVRGDMDVPTSTLIGAHGYCTQELVNLLLCGRAVSNVFDDEMKLDSGN
GNFTLLKGIKERCDFGLLSLYEHYNICKVGSYLKNPRFPIWVVCSESHFSVLFSPCEDLT
SSRRSPREFDLHYYDGLANQQDPVRLTVYPDSAVKMADAEDVDSDLTPPLELCIRTRWTD
AAVSWNDSEPIL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggggagagatgtggaggaggtcgcggccgctgtggtgcgggaatatctcagcagaaag
ggtctgaagaaaaccatcgcctgcatggacgaagagtttccacggacaaactcgagcata
aacaaccgctcggagctgtgccgagtgctccacttagagagtctgtacaagaagaataag
agcgaagatcggccgctgaaaaccatgctggagatcatgacgaaggagcggatgaagaag
gccggagacgtcaaaaagcgcccagtcgaaggggatgggagcgcggagcgtaccgcgtcg
aaacccggttctgactccgccgccgatgaagatcgcgtgacaaggggaagagatctcgca
caaccgcacacggacgagatgaggtcatctgagacgagcgccgtgtcccggctcggctcc
tcgtctccgccagagatagaaggaaacctcaacgccatgtcaccgacggcaggcccgggc
tcggagcagacgctcggaggtggggacgggcagacaagcaggggcagcagaatgaggaga
ggcatcatggcaggtcctattgctgcctcctctcagcaggaaaacgccaggagacgtggt
cctgtcagaaagaccgcagcgtctccgtctcttttacccaagaacgaagaagaggattcg
tccggacggaaccggaggaactggagcagcagcaccacgggcgcgtcacacaccggatcg
gacgagttgaacgccctcgagcgagaaagcacgccgtcgatcagacagactggacagagc
gacagaacgcctcgactcagggctcacagaaatgactcggcgcctagtccaagaccggat
gctcttcacatggcgggattggtcctggatgacgtagacgatcgggaagtctcgaccgga
ctgcccgctgttcccattgatatcctctcgcgtcaccgtgtctggaataaacgtcccatg
gaccagaaaacagctatcgcactgaaggagatcatcttcggctcccccgcggcctgcttc
agcgaggaatggagatgtcagagcttcagcttttccagcagacccgctctgagatacggc
atcgtgcagaagaagggcgggccgtgtggagtgctcgctgccgttcaggccgccgtcctc
cagaagcttctgttcggaggaaccagcactgacgcactttctgagagactgtccgacgcc
acgaggacgaagtgcctgactgacgccgtggctggaatcctgtggagagctgcagacagg
aagaacgtcaccgtcgccataaactcagggaggagtcagttcacccccatgggccactac
agatctgacggtgttctggacatgatcacctgcgtggacgttcagagctttgacgactta
aagctgctgatcgaacagcacgttcatcagtttgagtcgggtccgttcggctgcgtcttg
ctcatcgtctctgccgtcctgtccagaacgattcacacggtcagaggggacatggacgtc
cctacttccactctgatcggcgcacacggctactgcacgcaggagctggtaaacctgctg
ctttgcggacgcgcggtttcgaacgtgttcgacgacgagatgaagctcgactcgggaaac
gggaatttcaccctcctgaaggggatcaaagagcgctgcgacttcggactgctgtcgctg
tacgagcattacaacatctgtaaggtcggctcttacctgaagaaccccaggtttccgatc
tgggtggtgtgcagcgagagtcacttcagcgtcctgttctcgccgtgcgaggatctgacg
tccagccgccggagcccgcgagagtttgacctgcattactacgacggcctggccaaccag
caagaccccgtccgattaacagtgtatccagactcggctgtaaagatggcggacgccgag
gatgtggattcggacctcacgcctccgctggagctctgcatcaggaccagatggacggac
gcagccgtgagctggaacgacagcgagcccattctctga
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