KEGG   Ictalurus punctatus (channel catfish): 108266021
Entry
108266021         CDS       T04658                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 10 isoform X1
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108266021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    108266021
   03036 Chromosome and associated proteins [BR:ipu03036]
    108266021
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108266021
   Coactivators
    SAGA/TFTC/STAGA complex
     108266021
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108266021
    STAGA complex
     108266021
    TFTC complex
     108266021
    SAGA complex
     108266021
    SLIK complex
     108266021
SSDB
Motif
Pfam: TAF10 Bromo_TP SSP160
Other DBs
NCBI-GeneID: 108266021
NCBI-ProteinID: XP_017324448
Ensembl: ENSIPUG00000003048
UniProt: A0A2D0R1C0
LinkDB
Position
5:complement(23119075..23122739)
AA seq 188 aa
MNVDAAQAAPSGAASTNSSTPSSSNCVPNSNSAANVSSLPPTGSTNVPTSAAMATPSSDS
VSNGLYVPTGLANGDVKPVISSTPLADFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRI
IRLISLAAQKFVSDIANDALQHCKMKGTASGSSRSKTKQDKKYTLTMEDLTPALSEYGIN
VKKPYYFT
NT seq 567 nt   +upstreamnt  +downstreamnt
atgaatgtcgatgctgcacaggcggcgccgagcggagcagcgagcacaaactcctcaacc
ccgagcagcagcaattgtgtccctaacagcaactccgccgctaatgtcagcagtttacct
ccaactggcagcactaatgttccaacctcagctgccatggcaacaccatcatcagactct
gtgtccaacgggctgtacgtgcccacgggattagctaacggtgacgtgaagcctgtcatc
tcaagcacaccattggctgatttcctgatgcagctggaagactacacccccacaatccca
gacgcggtcacaggatattatctcaatcgagcaggatttgaagcatcagatccgaggata
atccgtctgatctcattggcggctcagaagtttgtctcggacatcgctaacgatgcactt
cagcactgtaaaatgaagggcactgcatctggaagctcccgaagcaagacaaagcaggat
aagaagtacacactgacgatggaggacctgactccggctttatccgagtatggcatcaac
gttaaaaaaccctactacttcacgtaa

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