Ictalurus punctatus (channel catfish): 108266031
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Entry
108266031 CDS
T04658
Symbol
nr5a1a
Name
(RefSeq) steroidogenic factor 1a isoform X1
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266031 (nr5a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108266031 (nr5a1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
108266031 (nr5a1a)
Nuclear receptors [BR:
ipu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
108266031 (nr5a1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108266031
NCBI-ProteinID:
XP_017324462
Ensembl:
ENSIPUG00000005986
UniProt:
A0A2D0R1E0
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All DBs
Position
5:3738618..3758209
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AA seq
482 aa
AA seq
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MLEAQSKVSAGSVMEFTTEEDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRY
TCNQNQDCGIDKTQRKRCPFCRFQKCLSVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQ
QKRALIRASAFKLEPNPPLVPSNQAEYPFPGSMPGLLPPLGPPDYDCLPTCPPSLGVALH
SYGSFPAQYQYTTPTVPGRSIKAEHPDPYSGSPDSSLGYPYAEGCIPASPQTSPLNPAVP
SLVLELLSCEPDEEQVRAKICAYLQQEQSGRGKLDKPRPSNLLCVMADQTLFSIVEWARS
CIFFKELKVGDQMQLLHNCWSELLLLDHVFRQVHHGRDHTLLLITGQEVELAGIVSDSGL
TLSSLVQRGQELARRLQLLQVDRREMACLKFLILFNPNVKLLENQALVESVQEQVNSALL
EYTLTSYPQHVDRFSQLVLRLPEVRALSAQAEEYLSSKHLSGDVPCNNLLIEMLHAKRAT
TI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggcgcaaagtaaagtgtccgcagggtcagtgatggagttcaccaccgaagag
gatttagaggagctgtgtcctgtgtgcggggacaaagtgtccggttaccactacggcctg
ctcacgtgcgagagctgcaagggcttttttaagcgcactgtgcagaacaataagagatac
acctgtaaccagaaccaggactgcggcatcgacaagacgcagcgcaagagatgccctttc
tgtcgcttccagaagtgcctcagtgtcggcatgaggttagaagcggttcgcgctgaccgt
atgcgaggagggaggaacaagtttggccccatgtacaaacgagaccgcgctctgaagcag
cagaagagagctctgatccgagcaagcgccttcaaattggagcccaacccaccactagtg
ccctccaaccaggcagagtatccgttcccaggctcaatgcccggtctgctgcctcccctc
ggccctccagactatgattgcctacctacgtgccccccctctttaggggtggccctgcac
agctatggctccttcccagcccagtatcagtacaccaccccgactgtgcccggtagatcc
atcaaagcagagcatccggacccgtattccggttctcctgactcatctcttgggtatccg
tatgccgagggctgcattcccgcctcaccacagaccagccccctgaacccagccgtgccc
tcgctggttctggagctgcttagctgtgagcctgatgaggagcaggtgagagcaaagatc
tgtgcctacctgcagcaggagcagagtgggcgtggcaagctggacaaaccccgaccctcc
aacttgctctgcgtgatggcggaccagaccctgttctccatcgtggaatgggcgagaagc
tgcatcttcttcaaggagctaaaggtcggagatcagatgcaactgctacataactgctgg
agcgagctcctgcttctggatcatgtctttagacaggtgcatcatgggagagaccatact
ctgctactcatcactggccaagaggtggagcttgcgggcatcgtgtctgactcgggtctc
actctctcgagtctcgtgcagaggggacaggaactggcacggcgactgcagctgctccag
gtcgaccgccgtgagatggcctgcctcaagttcctcatccttttcaaccccaacgtgaag
ctgctggagaaccaggcactagtggagagcgtgcaagagcaggtgaacagcgctctgctg
gaatacacactcacctcgtaccctcagcatgtggacaggttcagtcagctggtgctgcgg
ctgccggaggttcgtgccctgagcgcccaggccgaggagtacctgagctccaaacacctg
agcggagatgtgccctgcaacaacctgctcatcgagatgctgcacgccaagagagccacc
accatctga
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