Ictalurus punctatus (channel catfish): 108266048
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Entry
108266048 CDS
T04658
Name
(RefSeq) eukaryotic translation initiation factor 2D
KO
K15027
translation initiation factor 2D
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ipu03012
]
108266048
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
eIF-2D
108266048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pre-PUA
SUI1
PUA
Ca_chan_IQ
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
108266048
NCBI-ProteinID:
XP_017324495
Ensembl:
ENSIPUG00000012330
UniProt:
A0A2D0R3W1
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Position
5:complement(6573044..6587470)
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AA seq
589 aa
AA seq
DB search
MFTKAFRVKTNTVIKGSDRRKLRADVSTAFPSLSADDLNELVPNKEELNVVKIYAHKGDA
VTLYVLHRNPMFFQLEKQLYPTVYTLWRFPDLLPAFTTWPPVVQKLTGGADLMLPGVVVS
STGLQDVNQGGICAVNIVSNRAPVAVGTAAMSSREMRTSGMKGKGVNVLHTYMDQLWAFG
DKTAPPVIPVTDPSVQAEADMDGGDSGEEGTEALALKTVGQNDSGTAAVESSCRNLQDLS
LREGEKEETEEVQEEQEDSRSPQEQMDSLLLQCFLHALKSKVKKSELPLLTGTFLRKHMA
SCCPKGKNLDIKKSSYKKLSKFLQSMQKEHNLVRVKELSKGVDSIVEVDWKNPELCSFCI
PEDWEPPEECAEDRESCEEVYKPPEITPLYGVTARLEPLFQDAQKKKGAVLHSSEVRIII
TDYVKRNELVHETNKSYVNINPVLCDCLLEKSEYQEVMVLKWDDLFSRTLSRMQSCHQLQ
FPGQSPVVRKGQVEPIDITVASRGSNKKVTIIKNLEVFGIQPAAVADTLQHLVQASSILH
DVPGAKERQLVQIQGNQVHHVGKLLLEQYQIPRKYIQGLDKAPKAGKKK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaaagcgtttcgtgtgaagaccaataccgttatcaaaggatccgacaggagg
aagctgagagcagacgtctccactgcttttccgtccctctctgccgatgacctcaacgag
ctcgtaccaaacaaagaagaactgaacgttgtcaaaatctacgcacacaaaggagatgct
gtcactctgtatgtgctccacaggaacccgatgttcttccagctggagaaacagttgtac
cctacagtgtacacactatggcgatttcctgatctgttacccgccttcacaacatggcct
ccagtggtacagaaattaactggcggggcagatctgatgctgccaggagtcgtggtgtcc
tctacaggtctacaggacgtaaatcaagggggcatctgtgcagttaatatcgtgtcaaac
agagccccagttgctgtggggacagcagccatgtcgagcagagagatgaggaccagtggg
atgaagggaaaaggagtaaatgtgttacatacatacatggaccagctgtgggcttttggg
gataagaccgctcctcctgtcatcccagtcactgatccttcagtccaggcagaggcggac
atggatggaggggacagtggcgaagagggaacggaagctttggctctgaagaccgtagga
cagaatgactctgggacggctgcagtggagtcgtcttgtcggaatctgcaggatctcagt
ctccgagagggagagaaggaggagacagaggaggtgcaggaagaacaggaggattcaaga
tctccacaagagcagatggattctctgctgctgcagtgtttccttcatgccctgaagagt
aaagtgaagaagtcggagctccccctgctgaccggcaccttcctgcgcaagcacatggcc
tcatgctgtcctaaaggaaaaaatcttgacatcaaaaaatccagctataaaaagctctcg
aagtttctgcagtctatgcagaaggagcacaatctggttcgagtaaaggagttgagtaaa
ggagtggacagcattgtagaggtcgactggaagaaccctgagttgtgttctttctgcatt
cccgaggactgggagcccccagaggagtgtgctgaggatagagagagctgtgaggaggtt
tataagccccctgaaatcaccccactttacggggtcaccgcacgcctggagcctctattc
caggatgcgcagaaaaaaaagggtgcagtgctacattctagtgaagtgaggatcatcatc
acagattatgtaaaaagaaacgagcttgtccatgaaaccaacaaaagttatgtgaacatt
aatcctgtgctgtgtgactgcttactggagaaatctgagtatcaggaggtcatggtgtta
aaatgggatgatctattcagccggactctgagcaggatgcagtcgtgccatcagctgcag
tttccaggccagtctcctgtggtccggaaagggcaggtggagcccattgatatcactgta
gcctccagaggctctaacaagaaggtgactataataaagaacttggaggtgttcggtata
cagccagcagcggtagcagacacgctgcagcatctagtccaggccagttccatcctccac
gacgtccctggagccaaagagcggcagctggtgcagatccagggcaaccaggtgcatcac
gtcggcaaactgctactagagcaatatcagatccctcgcaaatacatccagggtttggat
aaagctccgaaagcaggcaagaagaaataa
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