Ictalurus punctatus (channel catfish): 108266087
Help
Entry
108266087 CDS
T04658
Name
(RefSeq) yrdC domain-containing protein, mitochondrial
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108266087
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108266087
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
108266087
Ribosome biogenesis [BR:
ipu03009
]
Prokaryotic type
Other maturation factors
108266087
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
108266087
Prokaryotic type
108266087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-GeneID:
108266087
NCBI-ProteinID:
XP_017324608
Ensembl:
ENSIPUG00000014985
UniProt:
W5UDQ8
LinkDB
All DBs
Position
1:complement(20653786..20658416)
Genome browser
AA seq
263 aa
AA seq
DB search
MNVCSFARTLSLSSQLSRPFPVRIRAMCKELKTSVLLLLPPDTNGPLAQSRHTAEGAQIL
HATLKALKEGQVIAVPTDTIYGLACLAQNSEAIKRVYDIKGRNGNKPLAICVGEVQDIYK
YCKVTVKEELLKDLLPGPVTLVLERSETLNADLNPFTRLVGVRIPDHCFMRRLCQMCEEP
LALTSANISTQSSTLAVHEFEELWPRLAIVVDGGPIADQSRLGSTVVDLSVPGRYRIIRP
GCAYSATVAILEKKYALLEDSSN
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtgctcatttgctcgtaccttgagcttgtcctcacagctctctcgtcctttc
ccagtgagaatcagagcaatgtgtaaagagctgaagacctcagtgctgctgttattgccg
cccgacacgaatgggccgctggcgcagagcagacacacagcagaaggagcacaaatcctc
cacgccacactaaaggctctgaaagaaggccaggtcattgctgttcccactgacacgatc
tatggcctggcttgcttggctcagaattcagaagctatcaagagggtgtatgatatcaag
ggcagaaatggcaacaagcctttagccatttgtgttggagaagtacaagatatatacaag
tattgtaaagtaactgttaaagaagagcttctgaaagatctccttcctggaccggtcact
ctggttcttgaaaggtctgaaacactgaatgcggacctcaatccattcactaggcttgta
ggtgtccgcatcccagaccactgcttcatgagacgcttgtgtcagatgtgtgaagagccg
cttgctctaacaagtgctaatatcagtacacagtcaagcactcttgcagttcatgagttt
gaggagctgtggccaagattagccattgtagtggatggtggcccaatagcagatcaaagt
cgactgggctcgacagttgtggacctctcagtgcctggcagatatcgcattataagacct
ggctgtgcctattcagccacagttgctatacttgagaagaaatatgcgttattggaggat
tcttccaattaa
DBGET
integrated database retrieval system
