Ictalurus punctatus (channel catfish): 108266123
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Entry
108266123 CDS
T04658
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108266123
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108266123
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108266123
04090 CD molecules [BR:
ipu04090
]
108266123
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Tumor necrosis fators
108266123
CD molecules [BR:
ipu04090
]
Proteins
108266123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
108266123
NCBI-ProteinID:
XP_017324634
Ensembl:
ENSIPUG00000000324
UniProt:
W5UAL7
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Position
6:complement(17003291..17015598)
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AA seq
272 aa
AA seq
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MSAVRTAPVQAESQRLSWVVGVVTVVAITSSLLSALSLYHVLALQAEVEVLRNEVSRRRE
GCRDTPRESVRGPQPHQQQHEDDRNKALVSTSVAPPNMQMDASRRQQEKFKLKKRSLASE
SEQSVVQPFLQLMADSKREIFQKEFTQEKHTGIPWQASLKQGSALEEEQDVIVVKEEGYY
FIYSQVYYKDPTFAMGHIVIRMKKYVVGDESQHVVLFRCIQSMNVKVPYNTCYTGGIVKL
DVGDRVELLIPRPTATISLDGDCTYLGAIKLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagtacgtactgctccagttcaggcggagagtcagaggctttcctgggttgtt
ggggttgtgactgtggtggcgattacctcatccttgctatcagctctgtccctataccac
gtgctggctctgcaggcagaggtggaagtgctgaggaacgaagtgagccgcaggagagaa
ggatgcagggacacaccaagggaaagtgtgagaggacctcagcctcatcagcagcaacat
gaggacgacaggaacaaagccctggtgagtaccagtgtggcgccccctaatatgcagatg
gatgcttctagaaggcagcaagagaagttcaaattgaagaagagaagtctggcaagtgag
tctgaacaatcagtggttcagccattcttgcagctgatggcagacagcaagagggaaatc
tttcagaaagagtttacacaggagaaacacactggcattccgtggcaggcaagcctaaaa
caaggctcagctcttgaggaggaacaggatgtcatagtggtcaaagaggagggctactac
ttcatttacagtcaggtttattacaaagaccccacttttgcaatgggtcatatcgtaatc
cgcatgaaaaagtatgtggttggggacgagagtcaacatgttgttctgttccgatgcatc
cagagcatgaacgtgaaggttccttataacacctgctacacaggagggatagtgaagcta
gatgttggagacagagtggagctgctcatacctcgccccactgcaaccatctctctggat
ggagactgcacctacctgggggccatcaaactggcctga
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