Ictalurus punctatus (channel catfish): 108266169
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Entry
108266169 CDS
T04658
Name
(RefSeq) neurogenic differentiation factor 1
KO
K08033
neurogenic differentiation factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266169
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Atonal
108266169
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neuro_bHLH
HLH
Drc1-Sld2
CCDC106
Nop53
CDC45
DUF5896
Motif
Other DBs
NCBI-GeneID:
108266169
NCBI-ProteinID:
XP_017324697
Ensembl:
ENSIPUG00000005637
UniProt:
A0A2D0R250
LinkDB
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Position
6:complement(8303574..8306780)
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AA seq
382 aa
AA seq
DB search
MTKSCTEEPSMIESPTGSANWTDKKQKPGHEAMRKEDLENDEEEAVHRLEDAHELEEDEE
EEEEDEEEEEEGDDASKPKRRGPKKKKMTKARLQRFKMRRMKANARERNRMHGLNDALES
LRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGESPDLVSFVQALCKGLSQPTTNL
VAGCLQLNPRTFLPEQQSHAHGASVASYASMHPYCYQSPGLPSPPYGAADGAPHHTFHAK
TAAHAYGSTLLLPPPPPPPPQPPSAMQAEPFYDAALADCAHSPAASFDGPLSPPLSVNGN
FSFKHEPPTEFEKSYHGFGGGVQPYHHHAPPGHHHHHHPHHHHHAALYDLPPMENVVPYE
GHSHHERVVHMNAQLNAIFHDS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcttgcacggaagaaccctcgatgatcgagtctccgaccggcagcgccaac
tggaccgacaagaagcagaagcccgggcacgaggccatgcgcaaagaggacctggagaac
gacgaagaggaggctgtgcacaggctcgaggacgcgcacgagctggaggaggacgaagaa
gaggaagaggaagatgaggaggaagaggaagagggcgacgacgcgagcaagccgaagcgg
cgtggcccgaaaaagaagaaaatgaccaaggcgcgcctgcagaggttcaaaatgaggcgc
atgaaagcgaatgcgcgcgagcgcaaccgtatgcacgggctgaacgacgcgctcgagagc
ctgcgcaaggtggtgccgtgctactcgaaaacgcagaagctgtccaagatcgagactctt
cgtctggccaagaattacatctgggcgctgtccgagatcctgcggtcgggcgagagtccg
gatctggtgtcattcgtgcaggctttgtgcaaaggtctttcgcagcccacgactaatctg
gtggcagggtgcttgcagctcaatccgcggactttcttgcccgagcagcagagccatgcg
cacggagcgagcgtcgcttcatacgccagcatgcacccgtactgctaccagagccccggt
ctgccgagcccgccgtatggcgctgcggacggtgcgccgcaccacacgtttcacgccaag
acggcggcgcacgcgtacgggagcacgctgctcttaccaccaccaccgcctccgcctccg
cagccgccgagcgccatgcaggctgagccgttttacgacgccgcgctggcggactgcgcg
cacagccccgccgcgtccttcgatgggccgctcagcccgccactgagcgtcaacgggaac
ttttctttcaagcacgagccaccgacggagttcgaaaagagctatcacgggttcggcggc
ggcgtgcagccctaccatcaccacgcgccgccgggacaccaccatcaccatcaccctcac
caccaccaccacgcggctctttacgatttaccacccatggagaacgtcgtgccctacgag
ggtcactctcaccacgaacgagtcgtgcacatgaacgctcaactcaacgccatattccac
gactcgtga
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