Ictalurus punctatus (channel catfish): 108266208
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Entry
108266208 CDS
T04658
Symbol
thsd7ba
Name
(RefSeq) thrombospondin type-1 domain-containing protein 7B
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_spondin
TSP_1
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
108266208
NCBI-ProteinID:
XP_053536715
Ensembl:
ENSIPUG00000009908
UniProt:
A0A9F7R9W2
LinkDB
All DBs
Position
6:4442990..4583882
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AA seq
1882 aa
AA seq
DB search
MPQVPQVLQVLQVLQMLQVLQVLQVLQMLQVLQMLQVLQMLQVPQVLQVLQMLQVPQVLQ
VLQMLEVLQVLQVFQVLQVLQMLQVLQLLQMLQMLQVLQKYWTMILKDGLGAMCWPPRAG
NFLFLFVSLVLLQVTSSKNTHYSWKTGQWGRCKGEECGSSGVQSRSVWCVHSDGWHTHHS
NCQHSVRPDTQRPCFKVCEWHQDLFEWDVSEWSSCSLALSSNDLRTRPLASECVTAQHGI
QRRSVRCVRVLNGTSVSDRICEFFSPRPPLEQACLIPCPLDCVVSAFSSWSRCSRMCGVG
LRHRTRHVLAAPSYGGAGCPNLSETQPCEHTLPCPVGEDRNLYSLKVGAWSECRLQKDVL
MNGRTTLDFAVKERNMVKRHVQGGGYQHAHQGAHQHHQSHDHQEQNQPRQHVYGDRAHQT
AQQNRWRHYQNPNYPQRPEDQNHLRHRQQFQDQNGPQNQLHQRPLDQNQNQQDQELFQDQ
TQQTNQENQHQLHEDQNQVHQDQFQNRNQYQIDQLDQNRTYQFHHRSQNRLQHHHHHRHH
QSQHQHHEASRSWDVEIGYQTRQVRCMASDGKNSMLSLCSQDDEPATFRSCVMLRDCQTS
DWSSWSSCSKTCQSSDLSPGYRVRSRTVTQPSVGQGRECPALQEKEACNIIGDLLPKCPR
YEWRSTDWSECRVAPLLSHQEKKAVNISALCGGGVQSRETYCVQVQDETTPRHRRDVSRP
VSVSLCEDTLVPSSVRSCSLSCARSCLLSSWSSWGSCLPEDCNQGKRGYRERRRRVMGDG
SGSSKDCGHLVEFVPCEDPVCFQWRVEDEGACMPNEGTCGSGSRSQTVACVNSEGVGVEA
GLCEETPPPVKVACEVACPGDCVISSWSHWSECSQSCAKKNTEGRQSRSRTVLALPGEGG
KSCPPAPSLEEWRSCNDNPCVVFYWGASPWGPCVPDPSASLNRSDVSNDTWSCSAGLQTR
KVTCMKMNGGAVTAKRCPDSARPDSVQSCALPCKRDCVVTLFSEWTACPNTCLPANATTP
TQSRYRMVVQRAANGGQECPDTMFEERECEPLPVCPTYRWSTHKWQACTLVPDSVRQGAR
GAGEACGRGLEKRALSCVDENDELVGVSECVRWAGPTPPQVRSCWISCKDDCTFSPWSKF
TECSGCEGTRTRKRSVTGRSRKRERCLKEDLYPLVESEPCVCDELISEPWGNWSVCILPN
APSPLLPYGWRGEKEVRECGEGKRYHAMACLDQKGRLLDPSQCAETELQEEACSVPCPLD
CRLSSWSTWSPCTVSCGSGLRVRSRWLREKPFNGGRPCPKLDLKNQVSEVVPCRGVCAVY
QWVTESWSFCSINTVDEGSACGEGVQSRKIRCVLRGDGVNESRSVNESLCDQDDVPAQAR
TCTLPCPGDCVMSPWSQWSSCPMSCDVNSVRTRTRQMLRPPTAHATCPERNETEPCVVNA
NCFTYRYNVSGWSSCMLSEHAVCGEGTKTRLLDCIRSDDKLVDLSVCEELGLSQPWTLSG
TCRVDCPISCMLSEWTPWTECSHTCGNQGVTTRARRVLQEDHEEGRPCPSQLSQTKPCPI
RPCYSWLLGDWSSCYVEGAECGDGVRRRNVSCVVHWGHWPESAGPRPDVHAPAALVEDEK
CNEDFRTKNEPELQQPCFVPCPGDCHLTDWSSWSLCQLTCVEGRSFEVEGHQSRSRAVII
QTLENQESCPNQEIETRPCKGGKCNSYEWKTSAWSDNVREVWCQRSDGVNVTGGCFAVNK
PTSVRHCHPPCTKPFSHCKQSGVCGCEKGYTEVMNTHGFLDYCTRTPGGAGDTRKADVKS
SSGRVKPGPSQIHDFFGEWSLQALSPDGRIKMWVYGATAGGFILILFIITVSFLFCSRPV
KQSNSPPLQKALSLAYDGDVDM
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgcctcaggtgctgcaggtgcttcaggtgcttcagatgcttcaggtgctg
caggtgcttcaggtgcttcagatgcttcaggtgctgcagatgctgcaggtgcttcagatg
cttcaggtgcctcaggtgctgcaggtgcttcagatgcttcaggtgcctcaggtgctgcag
gtgcttcagatgctggaggtgcttcaggtgctgcaggtgtttcaggtgctgcaggtgctg
cagatgcttcaggtgctgcagttgcttcagatgctgcagatgctgcaggtgctgcagaag
tactggactatgattcttaaagatggactcggtgctatgtgctggcctccacgagccggg
aatttcctgttcctgttcgtttctctcgtgcttctccaggttacgtcctcgaagaacacg
cactactcgtggaaaacgggtcagtggggccggtgtaaaggagaagaatgtggttccagc
ggtgttcagtctcgcagtgtgtggtgtgttcactcagacggctggcacacacaccactcc
aactgccaacactctgtcaggcctgacactcagaggccctgcttcaaggtgtgcgagtgg
caccaggacctgtttgaatgggacgtgtctgagtggagttcctgctctctcgctctgagc
tctaatgacctgaggacgcgacccctggcctccgagtgcgtcacggcgcaacacggcatt
caaagacgttctgttcgctgcgttcgtgtgctaaacgggacgtccgtgtccgatcggatc
tgcgagttcttctctcctcggccgcctctggaacaggcgtgtctgatcccttgccctctg
gactgtgtggtgtctgctttctcatcatggtcacgctgtagcaggatgtgcggggtcgga
ttaaggcaccggacacgccatgttctagcagcaccctcgtacggtggagccggatgcccg
aatctgagcgaaacgcagccgtgtgaacacacgttgccgtgtccggtaggcgaggacagg
aatctgtatagcctgaaggtgggagcatggagtgagtgtagactgcagaaagatgtgttg
atgaatggaaggacgaccctggattttgccgttaaggagaggaatatggtgaagagacat
gttcaaggtggaggataccaacatgcacatcaaggtgcacatcaacaccaccaatctcat
gatcatcaagaacaaaatcagcctcgtcaacatgtttatggagatcgagcccaccaaacc
gctcaacaaaaccgatggcgacattatcaaaacccgaactacccacagcgacccgaagac
caaaaccaccttcgacaccgacagcaatttcaagaccaaaacggcccacaaaatcaactt
caccaacggcctcttgatcagaatcaaaatcagcaagatcaagaactttttcaagatcaa
acccaacaaacgaatcaagaaaaccaacaccagcttcatgaggaccaaaaccaggttcat
caggaccaatttcaaaaccgaaaccagtatcaaatagatcaactcgatcaaaaccgaacc
taccaattccatcaccgctcacaaaaccgccttcaacaccaccaccaccatcgtcatcat
caatcccagcaccaacaccacgaggcatccaggtcgtgggatgtggagatcggctaccag
acgcggcaggttcgctgcatggctagtgatggaaagaactccatgctgagtctgtgttcg
caagatgacgagcctgcgaccttccgctcctgcgtcatgctcagagactgccagacgtcc
gattggtcctcctggagctcgtgctcgaagacctgccaatcatctgatctgtctcctggt
taccgtgtgaggagtcgaaccgtgacccaacccagcgtcgggcaagggagagaatgcccc
gccctccaggagaaggaggcctgcaatattattggcgatttgcttcccaagtgccccagg
tacgagtggaggagtacagactggagcgaatgtcgcgtcgctcctctcctcagccatcag
gagaagaaagcggtgaacatcagcgctctgtgtggaggaggagtacagagcagagagacg
tactgcgttcaggttcaggacgagaccacaccacgacacaggagagacgtctctcggcct
gtcagtgtaagtctgtgtgaagatacgctcgtcccctcgtctgtccgttcctgctctctg
tcctgcgctcgttcgtgtctgctgtcctcctggagctcatggggttcctgtctgcctgaa
gactgcaaccaggggaagagaggttacagagagaggagaagacgggtgatgggagacgga
tctggaagctcaaaggactgtggccacctggtggagttcgtcccctgtgaagatcctgtg
tgtttccagtggcgggtcgaggacgaaggagcgtgcatgcctaacgaggggacttgcggc
tctggcagcaggagtcaaactgtggcctgcgtcaactctgaaggtgtgggggtggaggcg
gggctttgtgaggaaactccgccccctgtgaaggtagcctgtgaggtggcctgtcccggt
gactgtgtgatcagctcctggtctcattggtctgaatgttctcagtcctgtgccaagaag
aacacagagggcaggcagagtcgctcacgcaccgtactcgctttacctggggaagggggt
aaatcgtgtcctcctgccccgtctctggaggagtggagatcctgtaacgataatccctgt
gtggtgttttattggggagcgtctccgtggggtccgtgcgtccccgatccctccgcctct
ctgaacaggagcgacgttagcaatgacacgtggagctgctcagcggggcttcagacacgc
aaagtcacctgcatgaagatgaatggaggagccgtcaccgcaaaacggtgtcctgactca
gcgagaccggactccgtgcagtcgtgtgcgttaccgtgtaagagggactgtgtggtgact
ctgttcagtgaatggacagcctgccctaacacctgcctacctgctaacgcgaccacgccc
acccagtcacgctacaggatggtggtccagcgagcagccaacgggggtcaggagtgtccc
gatacaatgtttgaggagagggagtgtgagccacttcctgtgtgtcccacctacaggtgg
agcacacacaaatggcaggcgtgtacgctggtcccggattcggtccgacagggagcgagg
ggagcgggggaagcatgtggaagaggcctggagaagagagcactgagctgtgtggatgag
aacgacgagctggtgggcgtgtctgagtgtgtgcggtgggcggggccgacgccacctcaa
gtgcggagctgctggatttcctgtaaggacgactgcaccttcagcccctggtccaagttt
acagagtgttcaggctgtgaagggacacgcacccgcaaacgcagtgtcacagggcggagc
aggaagcgagagcgctgtctgaaggaggatttgtatccgctggtggaatctgagccgtgt
gtgtgtgatgagttgatctcagagccgtgggggaactggtcggtgtgtatcctgcctaat
gccccgtcccctcttttgccttatggatggcggggggaaaaagaagtacgtgagtgtggg
gagggaaaacgctaccatgcaatggcctgcctcgaccagaagggacgccttcttgaccca
tctcaatgtgcagagacagagttacaggaggaagcatgctccgtcccctgtcccctggac
tgtcgtcttagctcctggtcgacctggtccccctgcactgtgtcctgtggcagcggactg
agggttcgctccagatggctgcgggagaaaccgtttaacgggggacggccctgtcccaaa
cttgacctgaagaatcaggtgtctgaggtcgtgccgtgtcggggtgtgtgtgcagtgtat
cagtgggtaacagagtcttggtccttctgctccatcaacacggtggatgaagggagcgca
tgtggagagggagtgcagagccgcaagattcggtgtgtactacgtggtgacggtgttaat
gagagtcgcagtgttaatgaatctctctgtgatcaggacgatgttcctgcccaggctcgc
acctgcaccctgccatgtcctggtgactgtgtgatgtcaccctggagtcagtggagctca
tgtcccatgtcgtgtgatgtgaactctgtgaggacgaggacaagacagatgctccgcccc
cccaccgcgcacgccacctgtcccgagagaaatgagacggagccgtgcgtcgttaacgcc
aactgtttcacctaccggtacaacgtctctggctggagtagctgcatgctgagtgagcat
gctgtatgtggtgaggggaccaagacacgtctgcttgactgtatacgcagtgacgacaaa
ctggtggatctgagtgtgtgtgaggagttgggactttctcagccctggacgctcagcgga
acctgccgcgtggactgtcccatcagctgcatgctctctgaatggacaccgtggaccgag
tgctcacacacctgtggaaaccagggtgtgacgaccagagctcgacgtgtcctccaggaa
gatcacgaggaaggtcgtccgtgtccgtcccagctctcgcagactaaaccgtgtcccatc
aggccttgctacagctggctgctgggggactggtcatcctgctacgtggagggtgctgag
tgcggggacggcgtgagacgcaggaacgtatcatgtgttgttcactggggtcattggccc
gaatcggccggaccgagacctgatgtccatgctccagctgccctggtggaggatgagaaa
tgcaacgaagacttcaggacaaagaatgagccggaactgcagcagccatgcttcgttccc
tgcccaggcgactgtcacctgacagactggtcgtcatggagcttgtgtcagctgacgtgc
gtggaggggcgcagttttgaggtcgaaggtcatcagtcacgctcacgagccgtcatcatc
cagacgctggagaaccaggagagctgcccaaaccaggaaatcgagacacggccatgtaaa
ggagggaagtgcaacagctacgagtggaagacgagcgcgtggagcgacaacgtgagggag
gtgtggtgtcaacgctcagacggagtcaacgtcacaggtggatgtttcgcggtgaacaag
ccgacgagcgtgcgtcactgccatcctccctgcactaaacccttctctcactgcaaacag
agcggagtgtgtggctgtgagaaaggctacacggaggtgatgaacacacacggcttcctg
gattactgcaccaggacacctgggggcgccggagacacccggaaggccgacgtgaagagt
agctcagggagggtgaagccgggcccgtcccaaatccacgacttcttcggcgagtggtca
ctacaggccctcagcccagatggacggataaagatgtgggtgtacggagccacggccgga
ggcttcatcctcatcctctttatcatcactgtgtcctttctcttctgcagtcgaccagtt
aaacagagtaactcccctccgctgcagaaagcactgtctctggcctacgatggagacgtg
gacatgtga
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