Ictalurus punctatus (channel catfish): 108266232
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Entry
108266232 CDS
T04658
Symbol
mcf2lb
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X2
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266232 (mcf2lb)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108266232 (mcf2lb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
TADA2A-like_3rd
Motif
Other DBs
NCBI-GeneID:
108266232
NCBI-ProteinID:
XP_017324778
UniProt:
A0A2D0R2D3
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All DBs
Position
6:complement(15270478..15314114)
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AA seq
1082 aa
AA seq
DB search
MDVQNRQRCIRIPLKEAEKYHRLTLCCRHLYNEIMQKETSPICAADIITELKKKFAFLSG
GRGQDGSPIIIFPEFTSFGEISDQEFHNVLTYLTSVPSLSAAGVGFILVIDRRQDRWTCV
KGTLLRISSGFPGNLRLVLVLRPHTLLQRTLSDIFFKFHGDDFKMKVPVIMLSSVAELHS
YIERSQLTQELGGTQQYCHNTWISHRTDIEGFAVLVKRMTQRLQVFGRELAETELPDTTL
ATSNLLKTHSSKKDSMKEELAGALGQGRKILGNIREPVRRDPDGSLNPDQLENLATVHRL
LSQLNECSTAFDDFWLQHQNKMEQCLQLCQFEHNFQEVTAELKLVTDRLAAFSHVGISQT
YTEHLLIELTDQEDKSFELLDRMEALIIEGQHFTDSCENSNDNVKMKCADLQNAKENLLQ
KFKTKRCLLLQAIELHQKLQSLCKWSDDGIYILASQQLDKCQSQEGAESALQELEGYMET
GNELQQWDVCVFCREYESVLSKELKEQVERVFEKRVLLQEMFQKRRVSLKKLAAKQTRPV
QPVAPTPEAIKSPPSSPDLRDCGKSHASIDPQSDFNEVSSEQNTGGSRTVSVSDEEENLA
VLRRHVMNELLETERAYVEELLCVLQGYAAEMDNPAMASIIPAALQNKKNVLFGNMQEIY
FFHKTIFLRELETYTDHPELVGRCFLERMGDLQIYEKYCHNKPRSESLWRQCSDCAFFQE
CQKKLEHKLGLDSYLLKPVQRITKYQLLLKELIKYSKGCEGVVELQAALSSLLGILKAVN
DSMHLIAINGYEGNLGDLGRLLMQGSFSVWAEHKRGHVKMMELARFKPMQRHLFLHEKAL
LFCKKREENGEGYEKAPSYSFKQELSMSAIGITEHAKGDNKKFEIWLNSRDEVYTVQAAS
EEIKTIWVREIRKLLTGQLEACREASQQKTTAQLNAEDNSLERPMRDGLSNINGGVEKRR
TEEEGGNEPSSPGHKKPERAMSSFSGSDTKPKRQDVKSDPTPLETGSHPHLSGVKWLSTS
SLFQNRRKGWIKGSVSLDPSEEHVGYFIHEDQVTSEPEEEQENKLDCECVSATGEEPKAT
ES
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacaaaacagacaacgatgcatacgcattccactgaaagaggcagaaaaatat
caccggttgaccctctgctgtcgtcatctctacaatgagattatgcaaaaggagacaagt
ccaatctgtgctgctgacattatcactgaactgaagaagaagtttgccttcctgtcgggt
ggcagagggcaggatggcagtcctatcattatcttcccagaattcacatcatttggtgag
atcagtgatcaagagtttcacaatgttctcacctatctgacaagtgttcccagtttgagt
gcagcaggggtgggcttcatcttagtgattgacaggcgccaggatcgctggacatgtgtg
aaagggacattactccgtatctcgagtggcttcccaggaaacctacggctggtcctggtg
ctgcggccccacacactcctccagcgcactctttcagacattttcttcaaattccatgga
gacgatttcaagatgaaagtgccggttatcatgctgagctcagtggctgagttacattcg
tatatagagcgaagtcagctgacccaagaactaggtggcactcagcaatattgccataac
acctggatctcccaccgcacagacatagaaggctttgctgtcttagtaaagaggatgaca
caaagactgcaggtgtttggtagggagctggcagagactgagctaccagacactactcta
gcaaccagcaatctgctgaaaacacacagcagcaagaaagatagcatgaaggaggagctg
gcgggagctctgggacaagggcgtaagatcttggggaacatccgtgaaccagtgcgcagg
gacccagacggcagtctgaacccagaccagctggagaacttggccactgtgcataggcta
ttgtctcagttaaatgagtgttcgacagcatttgatgatttctggctacagcatcagaat
aagatggaacagtgcttgcaactctgtcaatttgagcacaactttcaggaggtgacagca
gagctgaagctagtgactgatagactggctgctttctcacatgtaggaataagccaaacc
tacacagaacatctcctcatagaactgactgaccaggaagacaaatcctttgaacttctg
gacaggatggaagcactgattattgaaggccaacatttcactgacagctgtgaaaatagt
aatgataatgtcaagatgaagtgtgctgacctgcaaaatgccaaagagaatctcttacag
aagttcaaaaccaagagatgtctgctgctacaggccatcgagctccatcagaaattgcag
agtttatgtaaatggtctgatgatggtatttatatactggcatctcagcagcttgacaag
tgtcagtcacaggagggggcggagtctgcactgcaggagctggagggctacatggagaca
ggcaatgagctacagcagtgggatgtatgtgtgttctgcagagagtatgaaagtgtgtta
agcaaagagctgaaggaacaagtagagcgagtgtttgaaaagagggttttgctacaggag
atgtttcagaaacggagggtcagtctcaagaagctagcagccaaacagacacgcccagtc
cagcctgtagcccctacgcctgaagccattaaatcacctccttcctcaccagatcttaga
gactgtgggaagagccatgctagtatagacccccagagtgactttaatgaagtatcttct
gagcaaaatactggaggcagccgtactgtctcagtgtcggacgaggaggaaaacctggct
gtactccgcaggcatgtaatgaatgagctgctggaaacagaaagagcatatgtagaagaa
cttctgtgtgttctacagggctatgctgctgagatggacaaccctgccatggcatccatc
attcctgctgccctgcagaacaaaaagaatgtgctgttcggtaacatgcaggagatctac
ttcttccacaaaacgatatttctgagagagttggaaacttacacagatcaccctgaactt
gtgggccgctgttttcttgagaggatgggagacctgcagatttatgagaaatactgccat
aataaacctcgatctgagagcctgtggagacagtgctcagattgtgcattctttcaggaa
tgtcagaagaaactggaacacaaactagggttggactcttacctactgaagcctgttcag
agaattactaaataccaactcctactgaaggagctgattaagtacagtaaaggctgtgag
ggtgttgtggagctacaggcagctctctcatctttactggggatcctgaaggcagtcaat
gattcaatgcaccttattgcaatcaacggatatgaaggtaaccttggtgacctgggccgg
ctgctgatgcagggttcattcagtgtgtgggcagaacataagcgtggccatgtgaagatg
atggagctggcacgtttcaaacccatgcagagacatctgttcttacatgagaaagctctg
ctcttctgtaagaaacgtgaagaaaatggcgaaggatatgaaaaagcaccatcctacagc
ttcaaacaagagctgagtatgagtgccattggaatcactgaacatgccaaaggagacaat
aaaaagtttgagatctggttgaactccagagatgaagtatacacggtgcaggcggcatcg
gaagagattaagactatctgggtgagagaaatccggaaacttctaacaggacagctggag
gcctgcagggaagctagccagcagaagactactgctcaattaaatgcagaggacaattca
cttgaaagaccaatgagagatggactgagtaatattaacggaggagttgagaaacggagg
acagaagaggaaggaggcaatgaacctagcagtccaggtcacaagaaaccagagagagca
atgagttcattctctggctccgacaccaaacccaagcgacaggatgtcaaaagtgaccca
acacccttagaaacagggtcacacccccatttaagtggagtcaagtggttaagtacatcg
agcctgtttcagaatcgtaggaaaggatggattaaaggctctgtttcattggatccctct
gaagaacatgttgggtatttcatccatgaagatcaggtgacctctgagccagaagaggaa
caagaaaataaacttgactgtgagtgcgtgagtgctacaggtgaggaacccaaagcaaca
gaatcatag
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