Ictalurus punctatus (channel catfish): 108266245
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Entry
108266245 CDS
T04658
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108266245
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Gene silencing
Transposable elements
108266245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
WHD_PriA
Motif
Other DBs
NCBI-GeneID:
108266245
NCBI-ProteinID:
XP_017324813
Ensembl:
ENSIPUG00000001157
UniProt:
A0A2D0R2G3
LinkDB
All DBs
Position
6:16004834..16008099
Genome browser
AA seq
356 aa
AA seq
DB search
MEYMYFLRRRRYKERVYRRWSSFLGLTEEECQEKLHLSSGMVLEICRLVADDVANPSGPS
ALPVAVKVTAALAFFANGSFQNTLGLVTGVSQSAISCAIHVVSSSLVRHAAYYIVFPAAS
ESQLRTKQDFMSKYGLPGVLGSIDCTHVQLRAPSTEPLSYVNRLGVYSINIQVVCDANCL
VTHVYANYPGSSHDSFILANSVIPTVFQRGSLDGWLIGDDGYPLKPWLLTPYITPTTRKQ
HVFNSVLNRARSVIERTFGMLKMRFKCLDRSGGTLQYSPKNVSAFFVACCVLHNIATHHG
CHFDLTEEALQDLRKREAELHEPYEETGEQLTEAWEGRDKLAAQLVLQVNEAPQED
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggagtacatgtattttctacgaaggcggagatacaaggagcgtgtatatcgtcgctgg
agctcctttcttggcttgactgaggaggaatgccaggaaaagttgcacctctccagtggc
atggttttagagatatgccgcctagttgcagatgatgtggccaatccgtcaggccccagt
gctctccctgtggccgtgaaagtcacagcagctcttgccttctttgctaatggttccttc
cagaacaccttgggcttggtgacaggtgtaagccagtcagctatcagttgtgctatacat
gtcgtttcttccagtctagtccgtcatgctgcatattatatagtcttccctgccgcatct
gagagccagctcagaactaagcaagatttcatgtctaaatatggattacctggggtttta
ggttcaatagactgcacacacgtgcagctgcgtgcaccctctaccgaacctcttagttat
gtgaatcgattgggagtgtactccattaacatccaggtcgtgtgtgatgcaaactgcttg
gtgacacatgtttatgccaattatccaggatcttcacatgactcatttatcctggccaat
tctgttattcctacagtgtttcagaggggcagcctggatgggtggttgataggtgatgat
ggctatcctttgaagccgtggctgcttacaccatacattacaccaacaaccagaaagcag
catgttttcaacagtgttttgaatagggccaggtcagtgattgagcgaacttttggaatg
ttaaaaatgcgtttcaagtgtttggaccgttcaggtggtacattacagtacagccccaag
aatgtcagtgcgttctttgtggcatgctgtgtacttcacaacattgccacacaccatgga
tgtcattttgaccttactgaggaggcattacaggacttaagaaagagagaagcagagctt
catgaaccatatgaggagactggagagcagctaactgaagcatgggagggacgggacaag
ctagctgcacagctggttctacaagtaaatgaggcaccacaggaggattaa
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