KEGG   Ictalurus punctatus (channel catfish): 108266252
Entry
108266252         CDS       T04658                                 
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108266252
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108266252
SSDB
Motif
Pfam: BRCT_2 BRCT RTT107_BRCT_5 FHA PTCB-BRCT EspA_EspE
Other DBs
NCBI-GeneID: 108266252
NCBI-ProteinID: XP_017324835
Ensembl: ENSIPUG00000005078
UniProt: A0A2D0R4V4
LinkDB
Position
1:10365205..10390283
AA seq 1910 aa
MGSRVYFLRRSLLFRKFSPHCCNCVQVCMDATQQIEDSFFGEEDDSDDEHELGEGKKQTE
PLAVLKVFKNNHIPETEVPLYQGENVLGRDSASCSVPLQARSVSSRHAVISISVFDADDR
RAHSEATEALLWDLGSLNGTRKGRLKLTPHVRYALTEGDGVVLADLPCQYVSLKNTERNT
KTSTADVGREKAKGSTSTGSSSEEGRTGKGVENGRKKCALPPVPVWTDEAKSLQSIQMTP
KKPETTLVPESDSDSDGEKHGRRERRRIVVSDSASSDLSSPTCSTFLTPANKIIPESEDE
SSITPSPALKGRFLKTGNDTEVSSDSSKPDPLHLDIDSDTDVEDEEVEMTKATPGFETAV
RAQVDAVNPADMHMDSDTDVEEEAMEKARSDPEASAAPSKQDSVNPAALSMDSDTDVEEN
EPVETDTAPLSGPKAALDEKKEPAGSAPFHLESDTDVDDEDVPPIQESRPPTSHVAELNM
NSDTDVEDDEDTTKAIEPPSGTEADSKDLGKTAKSLDGVNVPDAKMLRHQSDSDTDVEDD
ITEIRTPTVANVTGSSRTRSEIQTADERGTDARQDSPLQVQPVRDEVRLDSDTDVEEDEE
KVEENERKCAEAAVQIVHSSTPRSAGLSEEEMETQAFLSPPQLFKRPVLPSLLHPSVSPG
GVSHTDDDFAVAETQSFVCDAAQADATLDETPQFLGGPESRRSGGASSSQLGFSDISHQL
AEAREPAEEDWQLQATQLYAMKNSEGSTKAGKSLDLDATQAYADVPGQEEEDDGGKEEEE
EETQPLAAPGHSSIHIAETQLSKHRAQNEDNSDHDANKEVVASEPERKAEEDINAQMQVD
SHLYSADTLLIVRSPRQEEQTTQPYAFLMAQIQKEQEETEKEEHENKDQEVQETDEEERA
RNAVNESVGQENDAEKRKENDRTVTEKKNEVTSDGPEEEKKERDENRVENDDKVDEARTH
PAEADAIVETLSACEEEEQEEEQRNEPSSSRGTPPAEVESTQRLEPDHAHVAIAETLPMC
DEDEGQEEDENKPKSSRRPGRGRRAAKVDPVESDKVTSVTVAETQPMCEEDKEEQEEEQQ
SEAISTKRSSTRRRNAKAKPAKPVESRVAILETLPMCEEEEEREEMPQSEAKSGRKSRRG
RLTSKVEPTQPLDPDSSAETMKMDGQEEEQDCRRSLRGKETATAASGKGKGRGRATAEKE
KRGKRVKVVQELDSEEEVDQGNKGRGRKKTRQKSKDDAEARLELVEADHEEIEHLKTQEK
EEESERLQRGKKEEEDRLERERKEGEEREERELERARTESEKKEREEKEMESLERKKQPE
KERREQEEKDRVEHERIDGENKEKEEKEMRERQALEQTLEKERKKQEEMDRLAREKKDRE
EKEQLEKETREEKEKQEKEMEQKEKEKESKDNKEGVGKEKRPAPGKRKAGLERKGGKSKK
EEDQELEEGTKERLDSEQELSELQKQECEEGSSKKQEDEQAESEAKPRRGRRAARKSVAP
PAGVEDEGGPAKRTRSRSNSSNSVCSEQSTQDSLTEGRRRGGRRKAVEEVNETGRPSGRR
RTTTAPSTEKEDVKQAAHSRSNSRSSDGSSSSVATQNRGRGRNGRKSVKAEEPEEGEQSA
PVWRGRGRGRGRGGKCPGSNDVKAEAAGEPEKEEAEVMADAEDSVMSQSSSRGRKRGADV
SMLIAETPQTPKTPRRSLAGQTPKVLFTGVVDEDGEKVVVRLGGGLAKGVGDMTHLVTDK
VRRTVKFLCAVARGVPIVTPDWLSKCGKAGSFLSPNGFLVKDVEQEKRFNFSLQEALRVA
NSQPLLQGYEIHVTPSVKPEPSQMKEIITCSGARFLPKMPSARKAQTVVVVSCEEDRALC
ERARSLSFPVVSAEFLLTGILQQKADVQTHALSLSPAAAAPKPAARARRK
NT seq 5733 nt   +upstreamnt  +downstreamnt
atgggcagtcgtgtttactttttaaggcgtagcttactattcaggaagttttcccctcac
tgctgcaactgcgtgcaggtctgcatggacgcgacccagcagatcgaggactctttcttc
ggagaggaggatgactctgatgatgaacatgaactgggagaaggaaagaaacaaacagag
ccactggccgtactgaaagtgttcaaaaacaaccacatcccagagacagaggtgcctctc
taccagggagagaacgttttggggagagactctgcctcttgctctgtgccgctccaagcc
cgttccgtatccagccggcatgctgtcatctccatctccgtgtttgacgctgatgaccgg
cgtgcgcacagtgaggccacggaggccctgctgtgggacctgggaagtttaaatggcacc
aggaagggtcggcttaaactgaccccacacgtacgctacgcgctgaccgagggggatggc
gtggtgctcgctgatctgccctgtcagtacgtgagcctgaagaacacggagaggaacaca
aagacatccacagctgatgtcgggagagagaaagcgaagggttcgacgtccaccggcagt
agctcggaagaaggcaggacggggaaaggagtggagaatggcaggaagaagtgtgcgctg
cctcctgtgccagtgtggactgatgaagcgaaaagtcttcaatcaatacagatgaccccg
aaaaagccagagacgaccctagtgcccgagtctgactcggactctgatggagagaagcat
ggaagaagagagagaaggaggattgtggtctcagactcggcttcttccgacctttccagc
ccgacgtgttcaacgttcctgaccccagcaaacaaaatcattccagagagtgaggatgag
agctccattactccatccccagcactgaagggtagatttctaaagacggggaatgacact
gaggtctcctcagactcctctaaacctgacccactgcacttggacatagacagtgataca
gatgttgaggatgaagaggtggaaatgacgaaggctacgcccggatttgagactgctgtc
agagcgcaagtggatgccgtaaatcctgctgatatgcatatggacagtgacactgatgta
gaggaggaggcgatggagaaggccaggagtgatccagaagcttcagctgcaccttcaaag
caggactcggtaaatccagctgctctgtccatggacagcgatacagatgtagaggagaat
gagcctgttgaaacggacaccgctccgctttctggacccaaggctgctctggacgagaag
aaagaaccagcgggttctgccccgtttcacttggagagcgataccgatgtagacgatgag
gatgttcctcctatccaagagtccagacctccaaccagtcatgtagctgagctcaacatg
aacagcgatactgatgtcgaggacgacgaggacacaacaaaagctatcgagccaccttca
ggcactgaggcggacagcaaagatctggggaaaacggccaaatctctagacggcgtcaat
gttccagatgccaaaatgttgcgtcatcagtcagacagtgatacagatgtggaggacgat
atcaccgagatcagaactcccacagtagccaacgtaacaggaagctctcggacgcgttca
gagattcagaccgctgatgaacgcggcacagacgcgcggcaagacagtcctcttcaagtc
caaccggtgcgggacgaggtcaggctggacagcgacacggacgtggaggaggatgaagag
aaggtggaggagaatgagcggaagtgtgcagaagcagcagtacagattgtccactcgtct
acaccaagaagtgcaggcttgtctgaagaggagatggaaacacaagcgttcctcagtcca
cctcagctgttcaaacggccggttctcccctctctcctccacccttctgtctctcctgga
ggtgtcagtcacactgatgacgactttgccgtggctgaaactcagtcctttgtgtgtgat
gctgctcaagctgatgctacgctagacgagacgcctcagtttctgggtggccctgaatct
cggcgctcaggtggagcctcatcctcccagctgggcttttcagacatcagccatcaactg
gcagaagccagggaacctgcagaggaggactggcaactacaggcaactcagttatacgct
atgaaaaattcagaaggcagtactaaagctgggaaatcgctggatctagatgctacacag
gcttacgctgatgtcccaggccaagaggaggaggatgatggtggaaaagaggaggaagaa
gaggagacgcagccactggccgctccgggccactccagcatccacattgctgaaacacag
ctcagcaaacacagagcccagaatgaagataacagcgatcatgatgctaataaggaggtc
gttgctagtgaaccagaaagaaaggcagaagaggatattaatgctcagatgcaagtggat
tcacatctctactctgcagacactctgctgatcgtcaggagcccgaggcaggaggagcag
actactcaaccctacgctttcctcatggcccaaattcagaaagaacaggaggagacggag
aaagaggagcatgagaacaaagatcaagaggtacaagagacggatgaggaagaaagggct
cgaaatgcagtgaatgaaagcgtgggacaagagaatgatgcggagaaaagaaaagaaaat
gacagaacggtgacggaaaagaagaatgaagtgactagtgacgggccagaagaggagaag
aaggaaagggacgagaatagagtagaaaatgacgataaagtagatgaagcgcgaacacat
cctgctgaggctgatgctattgttgaaacactgtctgcgtgtgaggaagaagagcaggag
gaagagcagcggaatgaacctagctccagcagaggaacaccgcctgctgaggttgaatca
acacagcgtctcgagcctgatcatgctcatgttgctattgctgaaacactgcctatgtgt
gatgaagacgaaggacaggaggaagatgagaataaacctaagagtagcagaagacctggt
agagggagacgggctgctaaagttgatcctgtcgagtctgacaaagtcaccagtgtgacc
gttgctgaaacgcagcctatgtgtgaggaggataaggaggaacaggaagaagagcaacag
agtgaagccatatctaccaagagatccagtacgaggagacgtaacgctaaggcgaagcca
gcaaaacctgtcgagtctcgtgtcgccattcttgaaaccctaccgatgtgtgaagaagag
gaagaacgggaggaaatgccacagagtgaagccaaatctggtagaaaatcccgcagagga
aggctgacttctaaagttgagcccacacaacctctcgatcccgattcttctgctgaaaca
atgaagatggatggacaggaggaagagcaagactgtcggaggagcctgagaggaaaagaa
acagcaacagcagcatctggcaagggtaaaggcagaggaagagctacggcagagaaagag
aagagagggaagcgagtgaaagtagtgcaagagttggacagtgaagaagaggtagaccaa
gggaacaaaggaagaggacgaaagaagacgaggcagaaatccaaagatgatgccgaggcc
agactcgagctagtggaagctgatcatgaagaaatagagcatttaaaaacgcaagagaaa
gaggaggaaagtgagagactgcagagggggaagaaggaagaagaagatcggctagaaaga
gagaggaaggagggggaagagagggaagaacgtgaactggagagagcgagaacggagagc
gaaaagaaggaaagagaagagaaagagatggaaagtttggaaaggaagaagcagccggaa
aaagaaaggagagaacaagaagaaaaagacagggtagaacacgagaggattgatggagaa
aataaggaaaaggaagaaaaggagatgagggaaagacaagcgcttgagcaaacgcttgaa
aaagaaaggaaaaaacaagaagaaatggaccgattagcaagagaaaaaaaggatagagaa
gagaaagaacagctagagaaagaaacgagggaagagaaggaaaaacaagaaaaagaaatg
gaacaaaaggagaaggaaaaagagagtaaagacaataaagagggtgtgggaaaagaaaag
agaccagcaccaggaaaacggaaagcggggctagaaagaaagggagggaaaagcaagaaa
gaggaggatcaagaattagaagaaggaactaaagaaagactggactctgaacaagaatta
agtgagctacaaaaacaagaatgtgaagaagggagcagtaaaaagcaagaggatgaacaa
gccgagagtgaagcgaaacccagacgaggcagacgcgctgccaggaaatctgttgcgccg
cctgctggtgtggaggacgaaggcggtccagctaaaagaactcgctcgcgctccaactcc
tctaactctgtgtgttcagagcagtccactcaggatagcctgaccgaaggaagaagaagg
gggggaaggaggaaagctgttgaagaagtgaatgagacaggcaggccatcaggcagaaga
agaactaccacagcaccctctactgagaaggaggacgtaaagcaggctgctcactctcgc
tccaactccaggagctctgacggatccagcagcagtgtggccactcagaaccgaggcagg
gggaggaacgggaggaagagtgtgaaagcagaagagccggaggagggagaacagtcagca
cctgtgtggagaggaagagggagaggaagaggaagaggtgggaaatgtcctgggtcaaat
gacgttaaagcggaggcggcaggtgagccagagaaggaggaggctgaggttatggctgat
gctgaggacagtgttatgagccaaagcagcagcagggggcgtaaaagaggtgctgatgtt
tctatgctgatagcagaaactccacagactcctaaaacccctcgccgctctctagccgga
cagacacccaaggttctgtttacaggagtagtggatgaggatggggagaaggtggtggtg
cgtctgggtggagggctggcgaaaggtgtgggtgatatgactcacctagtgaccgataaa
gtccgtcgtaccgttaagttcctgtgtgccgtggcccgaggagttccgatcgttacccct
gactggttgagtaagtgtggtaaagcaggaagcttcctctcccctaatggattcttagtg
aaagatgtagagcaagagaagagatttaacttcagtctgcaggaagctctgagagtagcc
aactctcagcccttattgcagggctatgaaattcatgtaacaccctctgtgaagcctgag
ccgtctcagatgaaagaaatcatcacttgctctggggcacgctttcttcccaaaatgccc
tctgctcgcaaggctcagacggtggtggtggtgtcgtgtgaagaggaccgggcactgtgt
gaaagagctcggagtttgtcttttcctgtggtcagtgccgagttcctgctgactggcatt
ctacagcaaaaagcggacgtacaaacacacgcgctctctctctcacctgccgctgcagcg
cccaaacctgccgcccgagctcgtagaaagtag

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