Ictalurus punctatus (channel catfish): 108266298 Help Entry 108266298         CDS       T04658                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04382   Cornified envelope formation ipu04510   Focal adhesion ipu04512   ECM-receptor interaction ipu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ipu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108266298  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108266298   09142 Cell motility    04820 Cytoskeleton in muscle cells     108266298  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     108266298  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ipu04147]     108266298    00536 Glycosaminoglycan binding proteins [BR:ipu00536]     108266298 Exosome [BR:ipu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    108266298 Glycosaminoglycan binding proteins [BR:ipu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108266298 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  108266298 NCBI-ProteinID:  XP_053536876 Ensembl:  ENSIPUG00000000388 UniProt:  A0A9F7RHK3 LinkDB All DBs Position 6:16640800..16692156 Genome browser AA seq 1634 aa AA seqDB search MRVLSGLVFLLATVLFRADPSRAEGCSSSSCGKCDCSGVKGSKGERGFPGLQGNMGFPGV QGHEGPQGPMGPKGDIGEPGAHGMKGTRGLPGLPGIPGIPGHPGIPGQDGPQGPPGIPGC NGTKGDRGRDGIPGIPGLLGPPGFPGDPGMKGDPGGVIGGFIPQKGDRGFEGSPGLPGAQ GNPGPQGPVGPPGRDGLRGFPGDPGPPGPPGDKLSFVGPKGDKGEKGPAGLPGPPFPGVS GGPTTVYGPKGERGDTGEKGDRCSPYQAGIKGEQGPPGPEGKVGKNGENGAKGEKGDRGT DGFSGTKGQKGETGPPGYGHGAPGPKGASGLPGPIGEKGPPGYPGEPGLPGKNIMGTPGE TGFPGENGQKGDKGADGESLRGPKGADGLPGPPGPPGPLNEDCEVSTGEPGPPGPPGLQG EVGQKGDRGDTCTQCSASGPPGLPGSQGPKGNQGFPGQMGSKGQKGQPGPSGAPGFPGND GVQGLIGAPGARGEPGDIYIAPELKGEKGSPGFPGSRGLPGIDGIPGKDGRPGLPGIKGE PAREGIKGDRGQDGDPGIIGPTGERGPPGLPGFGRPGEPGEKGSQGAPGAPGKPGIPGSK GEPGKGVSTPGPPGPPGPRGETGLHGLQGERGPAGDQGWPGLPGEKGDPGFPGIGLPGPP GPKGHSGLPGAPGFPGDPGNPGQDGSPGLPGTPGQKGEPGIGLRGPKGSVGKPGVQGFQG EKGNLGMPGVPGTEGQPGPPGPQGVKGDPGPPGFPGLSGPPGPPGHGEPGLPGPMGPPGE PGPLGRIGSKGEKGPQGFPGPAMPGPQGEKGTPGLPGSPGPKGLSGEPGSPGKDGFPGER GHKGDIGIMGIPGSPGHQGQAGAPGAIGPRGDPGLTGPRGEFGEPGPKGERGDPGIQGPA GNMTEVEMEHMKGEKGDIGDRGDPGPTGQKGISGAPGDPGMRGKDGMPGTPGKSGEKGDP GLPGQPGPDGQPGLKGSMGEMGLPGESGPKGSKGIAGQPGHQGFKGDPGGKGEKGVAGLP GIGIPGIPGEKGEMGPPGFPGDAGQKGVKGALGIPGIPGTSGSKGDIGPIGYPGNPGVPG EKGVPGLPGLPGQPGLEGRPGEPGLQGPPGPHGQKGESGTDGVPGAIGERGEPGLPGRGF PGTPGQAGTKGEKGNQGPPGMSGSPGVPGSKGEKGLPGYVGSQGRPGERGLPGPSMEGPK GDKGVQGEPGEPGQTGAPGPAGVPGSSGAKGEKGDKGFPGTQGIQGLKGDKGLTGQTGEP GVPGYKGLKGEMGAPGLPGFQGLKGEAGLTGFKGELGDRGFPGAKGNDGPPGPPGINTFI KGDIGLPGPVGPQGLPGLPGYPGPKGQQGLIGMQGIKGEDGAPGYNGFPGAKGEPGHTGP SGPRGYPGPPGPDGVPGHVGPPGPSSMDHGFLVTRHSQSIEVPLCPQGTTPIYDGYSLLY VQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMPMSMAP ITGESIKPFISRCAVCEAPAMVIAVHSQTVAIPPCPQGWLSLWIGYSFVMHTSAGAEGSG QALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSEMFSKPVPTTLKAGNL RTHISRCQVCMKRT NT seq 4905 nt NT seq  +upstreamnt  +downstreamnt atgcgcgtcttaagcggcttggtgtttcttctggcaaccgttttgttcagagcagacccg agcagagcggaggggtgttcaagctcatcatgtgggaagtgtgactgcagcggtgtgaaa gggtcaaagggtgagagaggttttcctggtttacaaggcaatatgggatttcctggtgtg caaggtcatgagggcccccaagggccaatgggaccaaagggagatattggtgagccaggg gctcatggaatgaaaggaacacgtggccttcctggtttacctggtatcccgggaattcct gggcatccgggtatcccaggtcaagatggcccacagggaccaccgggtatcccaggctgc aacggaacaaagggggatcgaggtagagatggaatcccaggcataccaggattgctgggt ccaccaggttttccaggtgacccaggaatgaagggtgacccaggtggtgttattggtggg tttattcctcagaaaggagatagaggctttgaagggtcaccaggattgccaggggcacaa ggaaatcctggaccacaaggaccagttggcccaccaggacgagatgggcttcgaggattt cctggtgatcccggccctcctggccctcctggtgataagcttagttttgttggtccgaag ggtgacaagggtgaaaaaggccccgcgggtctaccagggcctccttttcccggagtgagt ggaggacccacaacagtttatggaccaaaaggtgaaagaggggacactggagaaaagggt gacaggtgttcaccatatcaagcaggaatcaaaggtgaacaaggacctccaggcccagaa ggaaaagtaggaaagaatggagaaaatggagctaagggggaaaaaggtgaccgtggtact gatggcttttctgggacgaaggggcaaaagggagagacaggacctcccggatatggtcat ggtgcacccggccctaaaggtgcttcaggcttaccaggaccgattggagagaagggcccc cctgggtatcctggagagcctggtctcccaggaaagaacattatgggtactcctggagag acaggctttcctggagagaatggacagaaaggagacaaaggtgctgatggagagtctctc agaggacccaagggagctgatggacttcctggtccacctggacccccagggccattaaat gaggactgtgaagttagtactggagaaccaggccctcctggacctcctggcttacaagga gaggtgggacagaaaggtgacagaggagacacttgcacacaatgctctgctagtggacct ccaggtttacctggtagtcaggggccaaaaggaaatcaaggtttccctggacaaatgggt agtaaaggacaaaagggtcagcctggcccttctggagcacctggatttccggggaatgat ggtgtccaaggtttgattggtgctcctggggcaaggggtgaaccaggtgacatctatata gccccagagctgaaaggagaaaagggctcacctgggtttcctggcagtaggggattacca ggcatagatggaattcctgggaaagatggacgtccaggtttaccaggaattaaaggagag ccagctagagagggtattaaaggtgaccgtggccaggatggagatcctgggataatagga cccactggtgagagaggacccccaggtcttcctggatttggccggcctggagagcctgga gaaaagggcagtcagggagctcctggtgctccaggaaagccaggaataccaggatctaaa ggtgaacctggaaaaggtgtaagtacaccaggacctccaggtccaccaggacctcgtggt gagacaggattgcatggccttcaaggtgaaaggggtcctgctggagatcaaggatggcca ggattaccaggtgaaaaaggtgaccctggttttccaggaatcggattaccaggtccacca ggtccaaaaggtcactctggtttaccaggtgcaccaggattccctggagaccctggcaat ccaggccaggacggttctcctggactcccaggaacacctggacaaaaaggtgaacctggc attggcctcagaggacccaagggctctgtaggaaagccaggagtgcaagggtttcaaggt gaaaagggtaatttaggaatgcctggagtccctggaaccgaaggacaacctggaccacct ggtcctcagggtgtaaaaggtgaccctggccctcctggattcccaggtttgtcaggacca cctggacccccaggacacggtgagcctggactacctggaccgatgggaccccctggggaa cctggtcccttaggtcgaattgggtcaaagggagagaaaggtccgcaaggttttcctggt cctgcaatgcctggtcctcaaggtgagaaaggcacccctggtttacctggatcaccaggg cctaaggggttgtcaggggaaccaggaagtccaggtaaagatggattccctggggagaga ggtcacaagggagatattggaataatgggaattccagggtcacctggacaccagggtcag gcaggagcccctggagccattggaccaagaggtgaccctggtctgactgggcctagggga gagtttggtgaaccgggccctaaaggagagagaggagatcctggtattcaaggaccagct ggtaatatgactgaagtggaaatggagcatatgaaaggagagaagggagacatcggagac agaggggatccaggccctacaggacagaaggggatttctggagcacctggagatcctgga atgcgtggaaaggatggaatgcctggtacaccaggaaagtcaggtgagaaaggtgatcca ggacttcccggacaaccaggaccagatggacagcctggattaaaaggcagcatgggagaa atgggattgccaggagaatctgggccaaaaggcagtaaaggtattgctgggcagcctggt catcaggggtttaagggtgatccaggaggaaaaggtgaaaagggagtggcaggtctgcca ggcataggaattcctggcatccctggtgagaagggtgaaatgggcccacctggtttccct ggggatgctggacaaaagggagtgaaaggtgcattgggaatccccggtatacctggaaca tcagggtcaaaaggagacataggcccgattggttacccaggcaaccctggggtaccaggt gaaaaaggagtccctgggttacctggattaccagggcagcctggtcttgaaggacggcca ggtgaacctggtctgcagggtcccccagggccacatggacagaaaggagagtcaggaaca gatggagtccctggagccattggagagaggggtgaaccaggtttacctggtagaggcttt cctggaacccctgggcaggcaggcacaaaaggtgaaaaaggcaaccaaggtccccctggc atgtctggaagccctggtgttcctggaagcaaaggagagaaaggcttgccaggatatgta ggtagtcagggtcgacctggtgaaagaggactacccggaccatcaatggaggggcctaaa ggggataaaggagttcagggagagcctggagagccagggcagactggtgctccaggtcca gcaggtgttccaggtagttctggtgctaaaggagagaaaggagataaaggtttcccaggc acacagggtattcagggtttgaaaggcgataaaggcctcactggtcaaactggtgaacct ggcgttccaggctataaaggactaaagggtgaaatgggagctccgggccttcctggcttc caaggattaaagggtgaggctggactgactggtttcaaaggagagcttggtgacagagga tttccaggcgctaaaggtaatgacggccctcctggacctcctggaatcaatacctttata aaaggagacattggtttgccaggaccagtgggtccccaaggtttaccagggttgccaggg tatcctggaccaaaaggacagcaaggattgattggtatgcagggtattaaaggagaggat ggggcaccaggatacaatgggtttcctggagctaaaggagaacctgggcatactggacct tctggacccagaggatatccaggccccccaggtcctgatggtgtcccaggtcatgttggt cctcctggaccctcctctatggaccatggcttcctagtgactcggcacagtcaatccatt gaagtgcccctgtgtccacaaggcaccactccaatctatgatgggtactctctcctgtat gtgcagggaaatgagcgatctcatggccaagacctgggtacggctggtagctgcttgagg aagttcagccccatgccattcctcttctgcaacatcaacaatgtgtgtaactttgcctct cgtaatgactattcctactggctcacatctcctgagcccatgcctatgagcatggctcct atcactggcgaaagcatcaaacctttcatcagcagatgtgcagtatgtgaggctcctgcc atggtgattgctgtgcacagtcagactgtagccatcccaccctgtcctcaaggctggtta tctctgtggattggttattcctttgtcatgcacaccagtgcaggggctgagggctctggt caggctctggcctctcctggctcctgtctggaggagttccgctcggctcccttcatcgag tgtcatggccgtggcacctgcaactactatgctaactcctacagcttctggttggccacc atcgaggatagtgagatgtttagcaaacctgtccccaccacactaaaggctgggaatctg cgaactcacatcagtagatgtcaagtgtgcatgaagaggacttaa

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