Ictalurus punctatus (channel catfish): 108266326
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Entry
108266326 CDS
T04658
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta
KO
K12897
transformer-2 protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108266326 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108266326 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108266326 (tra2b)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108266326 (tra2b)
Spliceosome [BR:
ipu03041
]
Common components
Common spliceosomal components
SR proteins
108266326 (tra2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108266326
NCBI-ProteinID:
XP_017324929
Ensembl:
ENSIPUG00000002730
UniProt:
A0A2D0R2Y3
LinkDB
All DBs
Position
6:complement(33794342..33799117)
Genome browser
AA seq
260 aa
AA seq
DB search
MIESRSESRSVSPRGSHKSLAHSPAHSKRDSCSKSHSRSCSKSDSRSHRSSRRSYSHSRS
CSRRCRSRSRCYSRDSRRRRSRSSSHSPMSNRRRHVGNRANPDPNTCLGVFGLSLYTTER
DLREVFSKYAPLTDVCIVYDQQSRRSRGFAFVYFENKEDSQEAKERANGMELDGRRIRVD
FSITKRPHTPTPGIYMGRPTYGGGGHSLSRRHDYYDRGYDRYDDRDYYSRSYRRRSPSPY
YSRGGYRSRSRSRSYSPRHY
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtctcgctcggagtcgaggagtgtgagtccacgaggttcacacaaatccctg
gcacactcgcccgctcactccaagcgtgactcgtgctccaaatcacactcccggtcgtgc
tccaaatcagactctcgttctcatcgcagttctcggaggagctacagtcactcacgctct
tgctctcggcgctgtcgctcacgcagccgctgctacagcagggattcgcggcgccgtcgc
tctcgcagctcctcacactcccccatgagcaaccgccggcgacatgtaggcaacagggcg
aaccctgatccaaacacgtgtttaggagtgtttgggttgagtttgtacaccacagagcga
gatctgcgggaggtcttctcaaagtacgccccgcttacggacgtgtgcatcgtctacgat
cagcagtcgcgccgctcgcgagggttcgcctttgtttactttgagaacaaagaggactcg
caggaggctaaagagagggcaaacgggatggagctggatggccgcaggatccgagtggac
ttctccatcaccaagagaccacacacccctactccggggatctacatgggccgacccaca
tatggaggtggaggtcacagtctgagtcggcgtcatgattattacgatcgaggctatgat
cgctatgacgaccgtgattactacagcagatcgtacaggaggaggtctccgtctccgtac
tacagccgtggtggatatcgctcacgttcacgctctcgctcctactccccccgtcactac
taa
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