Ictalurus punctatus (channel catfish): 108266356
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Entry
108266356 CDS
T04658
Name
(RefSeq) sushi repeat-containing protein SRPX isoform X1
KO
K23818
sushi repeat-containing protein SRPX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108266356
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
Sushi domain-containing proteins
108266356
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4174
HYR
Sushi
Motif
Other DBs
NCBI-GeneID:
108266356
NCBI-ProteinID:
XP_017325009
Ensembl:
ENSIPUG00000011005
UniProt:
W5UKW1
LinkDB
All DBs
Position
6:3507568..3521415
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AA seq
448 aa
AA seq
DB search
MDNWLSVCVLVGLQVACCLAYDGSGYWHYTDDEDVRYTGVPWCAPVKVKHGHASCQTPRG
EHYKNVLGTRCKVHCKRGYELHGSSEILCMASKQWSGKYTCREVRCPALAMPSNGGFKCS
DGSYYNSHCQFFCSPGYTLRGDRSVTCQSSKAWSGGQSLCLDLDPPVIKCPNVKEKTAEP
GKVTAKVTWDTPEGKDTADGILTDVILKGKPPGTHFTEGNHKQSYTVFDRAGNKATCKFN
IRVKVRRCVPLSVPENGWMKCDGAGDNYGATCDFRCLGGYELRGSAARVCQFNMEWSGLE
SSCASMNINVGVRSAAQLLDQFYEKRRLLIISTPTAANHYYRFQMTNLQQAQCGLDLRHV
TVIELVGRFPSQIGRIRYQLLPPGLALQLRMLLQLSQNSFNVVLLDKQGVDKQRYTYPVT
AAEIFSIIDSIPLRTEEALLQKEAGHGC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacaactggctgagtgtgtgtgtgcttgtgggacttcaggtcgcctgctgcctcgcg
tatgacgggtcggggtactggcattacactgacgatgaggatgtaagatacacaggtgtg
ccatggtgtgctccagtcaaagtgaagcatgggcatgcaagctgccaaacaccacgtggt
gagcattataagaacgtgttgggaacccgctgtaaagtccactgcaagagaggctacgag
ctccacggcagcagcgagatactctgcatggccagcaaacagtggtcaggaaaatacacc
tgcagagaggtccgttgtccggcactggccatgccatctaacggtggatttaagtgttca
gatggttcctactacaactcccactgccagttcttctgttcaccaggatacacactccgt
ggagaccgcagtgtcacctgccaaagcagcaaggcatggagcggcggccagagtttgtgt
ctggatctggatcctccagtcataaagtgtccaaatgtgaaggagaagacagccgagcca
ggaaaagtgactgcgaaagtgacctgggatacaccggaaggcaaagacacggcagatggc
atactcacagatgtaatactaaaggggaagcctccaggaacacactttacagagggaaac
cataaacagtcatacacagtgttcgaccgggcggggaacaaagctacctgtaaattcaac
atcagagtaaaagtgcgccgctgcgttcctctctcagtgcctgagaatggctggatgaag
tgtgacggtgcaggtgataattatggtgcaacatgtgatttccgctgcctgggaggttat
gagctgagaggcagcgctgctcgagtttgccagttcaacatggaatggtctgggctggaa
tccagctgtgcatccatgaacataaatgtcggagtgcggtctgctgctcagctactggac
cagttctatgagaaacgtcgtctgctcatcatctccacccccacagctgccaaccattac
tacaggttccaaatgaccaatttacagcaagcacagtgtggcttggacttaaggcatgtg
accgtgattgaactagtgggaaggtttccatctcaaataggacgtattagataccaactc
ctccctccaggactggccctacagctcagaatgctgctgcaactgtctcagaattcattt
aatgtggtgctgctggacaaacagggagtggacaaacagcgctacacatacccggttaca
gcagcagagatcttcagcattattgactccatccccctgcgcactgaagaggcccttctg
cagaaagaagcaggtcatggctgctag
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