Ictalurus punctatus (channel catfish): 108266364
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Entry
108266364 CDS
T04658
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266364 (cicb)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108266364 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
DUF3915
Motif
Other DBs
NCBI-GeneID:
108266364
NCBI-ProteinID:
XP_017325041
Ensembl:
ENSIPUG00000005917
UniProt:
A0A2D0R4R7
LinkDB
All DBs
Position
1:10844246..10900457
Genome browser
AA seq
2553 aa
AA seq
DB search
MRSLKKQRGRSPLSTRAKSVRKRGDKHDRQSQTTPAAASSQKNTPSKLDNSEGKTVKRSN
TPNREGLKGQIKGLSVEVDQAEQIVVRVNKMTTPENTSSKTHNITMTNSMISNPLSTNTA
ANSSNKSSSIITSHSPITLSSRKTATFKARVPKKKYMYEHGTVSTSPISPPAPSVALNSN
HLSKLCNPITPNSHPVANNVLTEADNVVMSANVNSKILAENKTSTENSTLNCVSREEVVK
DEVPCVRKSIVEQVKTDAFGEVAPNLACSASTETAGENSPGLEVVEPSNVHQNIRTTLNI
PKSPVTRALSLPPPLTQSNHQLEQESFSGIAEALAKGLKNQRVLARHQRTKELEGEESIK
ECVFIRGVVRGATKEQLNVGLQINGEEMQLLLPFTTLVNHPDQTIDLILDAPPPGNDPVE
VGTRVCVPYGEDKGKEWYREGVVSQVDSHPAVACPYRVLLHEENNHKKAGNKRDEGQQRT
GIQAVWVSRQNLRLLVPPWEGDVQEREERERREDMDVERELCQLSRGMTMGGTKPHQKNS
DIGGQQYEGTNTSSASSPAIMMSNSALIIVTGRDSQMAEDTDRERARERERERKQLQTPE
VDLEVLRLNLAPLHEAVGTLVSGVPKTVRPTNHRQIISKPSGYSSPISVVRGLAGTSLGT
HLTGLPSDSPQPLASSAFVSSDGVPLQPHSTAVPPSPSSKGSLTPLDKTSTPSQTSVPIP
GSSASSSASSSRSRTPLSAAQQIYKKGDVVCTPNGIRKKFNGKQWRRLCSKDNCMKESQR
RGYCSRHLSMRTKEIEGTGGERELKRGGGSSSGTATPSDLRGRASSEFDWEETSRDSSET
SSRGTDSRPRLVLPSLLPQDFSRFDFDECEAATMLVSLGSSRSGTPSFSPISNQSPFSPA
PSPSPSPLFGFRPANFSPITTLTVLPPRRHRHTSGTSSSKLSTLVAEKDRERLASGIVPS
FQTSLTFTVPVSPNKHKSDTSQPTALVMQDCTKLELDQSTGDLSVGTSFHVLSPQTTTFS
HCRRPTSSTTSSLPPSPLTLESGSQRAVPQQTLRDSPVIVRNPEVPLAKFAECPLVKVAD
QEGSNSKQDSLTGVLPGAGLQMPVPINAAASTNGAVLLHSPSSTLVLVSSISSLPNPNPT
SLTTQSSPALACISVPSPAPDSASYGSGGGDQGKGGITKLQQPVPCHPAPTALLPLLLPA
ETLHPVPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDPSTQPGEGQQPVNH
SQAGTLKKEAQGGAVVKEVVEGASNPTLRPAPSIDDLPPERERERETEKERPDSETESDV
DDPFLPGVLPDPPVSASPGKRRSQSLSALPKDDKNSPGKREKDHIRRPMNAFMIFSKRHR
ALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRK
KSSSESRNAPGGKDVRERSMSETTEPPSVSMGAELKGMGPSVVGVSERAGGERLARPRAF
SQSAMHSLERSERGNPQVLAELAQICGDGGQFSSRGGGLSQVQRGVSEDMTSDEERMVIC
EEEGDDDVIEDPYPGSSIDLKCKEKVTDSDSENGSGDEGERKRVFAPVICSSASGPGHGR
SISLSSYPSSRHSSDTSVKRKRVIEGGEGERRDGEAGASHCLPLSSSGQSISASASSTLG
AVRVASTIVTNVVRPVVSTPVPIASKSTQDRKAAAPQTQLVIGSGVAGSGTTMGGYYSSS
SPSPVTAPGGQGGLNLVLGGTFQAPSAVQLVTPPPCQNPASLATVTPTQCNGPAPLPLLQ
PHILPTASPAPSAGQKAVTQVQYILPTLSANNPKSPSPQLPSQPTSIFTLPTAPPTLASV
ANGKQSAYTSGPAVGMVSPGARVQTQSPVLHGKMLVPMATVRTTPAPSQQFPLMAPPLPV
QNGAQSGNKIIQIAPMPVVQSPLPSAGSPFPVTMAAATVVAPPGSTPSQAVLLPPPPTRI
TYVQSTPGGPSPIPLVSTATGSASQTAPPAPGSAYVPSPLATFAAIAHSGQTLVQPLIAG
QPPLLAPPQSPNPAITAIYPSATVTLATGVVSPATVPPGVVYTVSSPSILPKHTSTTSVT
PTTLTAPDRPGHGPAHAELDRQTDKPLLSHTDRLTKVGSSSTAPPPGATLPLQPASPAQP
PLAAAISKPARPPQKVKATVANIPVGCYDGGGRGKEREKDREKEREREKEKESSSCFSFE
VDKSGEMTAAAPTSLDDGSSEAEAHNVGEVGSTSTRSKESNAKEAEWKDSTSSSPLPQSA
SEPAPPLPQSDKDTPLPKKLKSRPPPLKRPFDSVDKVLSEVYFEERFAELPEFRPEEVLP
SPTLQSLATSPRAILGSYRRKRKNSTGERDLDSSTDDPISPKRKSRRRSSCSSEPNTPKS
AAKCEGDIFTFDRPGTDGEDILGELEFDKVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQ
ATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSEIAGTSDSASLPGPSGPAANEGV
GGSGSAEKEAERDEEQNNSEEPRNAGDSLDSTR
NT seq
7662 nt
NT seq
+upstream
nt +downstream
nt
atgagatctctgaaaaaacagagagggcgctctcctttgtccacacgggcaaagagtgtg
aggaaaagaggagataaacatgacagacaatcacaaactacacctgctgcagcgtcatcc
cagaaaaatactccatccaagttggacaactctgaagggaagacagtcaagaggagcaat
actccaaacagggaagggctaaaaggacagataaaaggactatctgtggaagtagatcaa
gccgagcaaattgtagtgagggtcaataaaatgactactcccgaaaacactagctcaaaa
acgcataatattactatgacaaacagtatgatcagcaacccactgagcacaaacacagca
gccaatagctcaaacaaaagcagctctatcatcaccagtcatagtcccatcacactctcc
agtaggaaaacagcaaccttcaaagccagagtgcccaagaaaaagtacatgtatgaacat
ggaactgtcagcacctctccaatcagtcctcctgcaccttcagttgcacttaatagcaat
cacctcagtaaactttgtaaccccattactcctaatagccaccctgtagccaataatgtt
ttaacagaagctgacaatgttgttatgtcggctaacgtaaacagcaaaattttagcagaa
aataaaacaagcacagaaaactcaacactcaattgtgtgagtagggaagaggttgtcaaa
gatgaagttccatgtgtgagaaaaagcattgtggaacaagtgaaaacagatgcatttgga
gaagttgccccaaacttagcttgctcagcatccacagaaacagccggtgagaactctcca
ggtctggaggtggtggagccctctaacgtgcaccaaaatatacggactaccttaaacata
ccaaaaagcccagtaaccagagcattatccctgcctccaccccttacccaaagcaaccat
caacttgaacaagaaagcttttcaggaatagctgaggcactggctaaaggccttaagaat
cagagagtgctagctcgtcatcagagaacaaaggagctagaaggagaagagtcaatcaaa
gaatgtgtttttatccgtggtgtggtgcgtggggctactaaagagcagctcaatgtagga
ctgcagattaatggggaggagatgcaacttttgctcccatttactacattggtaaatcac
ccagaccaaactattgacctcatcttagatgcccctccaccaggcaatgatccagtggaa
gtcgggacacgtgtttgtgtgccttatggagaagataaggggaaggaatggtacagggaa
ggagtagtgtcacaggtggactcccatccagctgttgcttgcccctatagagtgctactg
catgaagagaataatcacaagaaagcagggaacaaacgagatgaggggcaacagagaact
ggcattcaggctgtgtgggtttcccgacaaaacctgcgccttcttgtcccaccatgggaa
ggagacgtgcaagagagagaagaaagagaaagaagggaagatatggatgtagagagagag
ttgtgtcagcttagtaggggaatgactatgggtggtacaaagccacatcagaagaattct
gatattggtggtcaacagtatgagggcacaaatacttcatctgcatcctcaccagcaatt
atgatgtcaaacagtgcattaatcatagtgactggaagagacagtcagatggctgaggac
acagatagagaaagagcaagagaaagagagagagaaagaaagcagctacaaactccagag
gttgacttggaagttttaaggcttaacctggcacctcttcatgaagcagtaggtacttta
gtttcaggagtacccaaaacagttagacccaccaaccacagacagatcatttctaagcct
tctggatactcaagtcccatctcagttgtccgaggtctcgctggcacatccttgggtacc
cacttgactggactaccatcagacagccctcagccacttgcttcttcagcttttgttagt
tctgatggagttcctttgcaaccccactctacagctgtgcctccttcacctagctcaaaa
ggttcccttacacccctggacaagacctccactccttcacagacctctgtccctatccca
gggagttctgcttcatcctcagcttcctcctcacgatcacgaactccactttctgctgct
cagcaaatatataagaagggtgatgtggtgtgtacacccaatggtatccgcaagaaattt
aatggaaagcagtggcgtcgcttgtgttcaaaggataattgcatgaaagagtctcagcgt
aggggctactgctctcgacatctctccatgcgcactaaagagattgaaggaacaggcgga
gagagggagctaaagagaggaggcgggagcagttcaggaactgcaaccccttcagacttg
cgaggccgtgctagcagtgagtttgactgggaggagacatcacgggacagcagtgagacc
agcagtcggggaactgactcacgaccacgccttgttcttccatcactcctgccacaggat
ttttcacgctttgactttgatgaatgtgaggctgctactatgcttgtgtctttggggagc
tcacggtcaggaacaccctcattttcccctatatcaaaccagtcacctttctctccagct
ccttctccctctccttctccgctctttggtttccgtcctgccaatttcagtcctattaca
actttgacagtcttacctcctcgtcgccaccggcatacaagtggtactagtagctcgaag
cttagtaccttagtggcagagaaggatcgggagagacttgcatctggcattgtaccatct
ttccaaaccagtttaacctttactgtaccggtgagtcctaacaagcataaatcagatacc
tcacaaccaacagctcttgttatgcaggattgcaccaaacttgaactagaccagagcaca
ggggatctctcagtaggaacttcctttcatgtactttctcctcagacaaccactttctct
cactgcagaaggcccacctcatccacaacttcttcactaccaccttctcctttaacctta
gaatcagggtcacaacgtgcagtccctcagcagacactgcgtgactctcctgtaattgtt
cgaaatcctgaggttcctctagcaaaatttgcagaatgtccactggtcaaggttgccgat
caggagggatccaactccaagcaagacagcttgactggtgttctccctggtgcaggatta
cagatgcctgttccaattaatgctgcagcctccactaatggggcagttttattacatagc
ccttcatcaactctggttctggtgtcttccatctcttcccttccaaaccccaaccctaca
agcctcaccactcaatccagccctgccttggcctgcatatcagtgcccagtcctgcccct
gattctgcttcctatggttcaggaggaggagatcagggaaagggtggaataacaaaatta
cagcagccagttccatgtcatcctgccccgaccgctttgttgccacttttacttcctgca
gagactttgcaccctgtgccatgcaaggacatcatcatgggacgaccaggaactgtgtgg
actaatgtggagcctcgctcggttccagtgtttccttggcattcgttggtgccgtttctg
gcacccacccaatcagatccatcgacacagcctggtgagggccagcagcctgtcaatcat
tctcaggctggcacccttaagaaagaggcccagggtggtgcggtggtgaaggaggtcgtc
gagggggcatcaaaccctactttgcgacctgctccctctatcgatgacctccccccagag
agagaaagagagagggagacggagaaagagagaccagacagtgaaacagagagcgatgtc
gatgatccgtttttaccaggtgtcctcccagacccaccagtctcggcatctcccgggaaa
cgccgttctcagtctctgagtgcgctgcccaaagatgacaaaaacagccctggcaagagg
gagaaggatcacatccggaggcccatgaacgccttcatgatcttcagcaagcgccatcgt
gctctcgttcaccagcggcaccctaatcaggacaaccgcaccgttagcaagatcctggga
gagtggtggtatgctttgggacccaaagaaaaacagaaatatcacgaccttgcattccag
gtgaaggaagcgcactttaaggcccaccccgactggaagtggtgtaataaggacaggaag
aagtcgagcagcgagagccgtaacgcgccaggtgggaaggatgtccgagagagaagcatg
tcagaaacaacagagcctccatctgtttccatgggtgctgagctgaaagggatggggccg
agtgtggtgggcgtgtcagagcgcgctggaggggagaggcttgcacgccctcgtgccttc
tcgcagagtgctatgcacagcttggagaggagtgagagaggcaaccctcaggtgctagca
gagctcgcccagatatgtggggatgggggccagttttcaagccgtgggggaggactgtct
caggtccagaggggtgttagtgaagatatgaccagtgatgaggaacgcatggtcatctgt
gaagaggagggggatgatgatgtcattgaggacccttatccaggcagctctatagacctg
aagtgtaaggagaaggtgaccgacagcgacagtgaaaacggatctggggacgaaggtgaa
cgcaagagggtcttcgcccctgtgatctgctcgtcagcatcggggcccggtcacgggcgg
agcatatctctctcctcctacccttcctccagacactcctcggacacttccgtgaagagg
aagcgtgtgatcgagggaggagagggagagcgtagggatggcgaagctggtgcgtctcac
tgtcttcccctgtcttcctctggccagtccatttcagccagtgcgtcttcaacactggga
gcagtgagagtagcatccactatcgtcactaacgtggtacgtcctgtcgtcagtacgccg
gtgccaatcgccagcaaatcgacccaagacagaaaagccgccgctcctcagacgcagctt
gttattggatctggagtggcaggaagtggaacaactatgggcgggtactattcctcatct
tcgcccagtcctgtaactgcacctggaggtcaagggggactaaatctagtcttgggaggc
acattccaggcaccgtctgcagtgcagcttgtcacaccccctccttgtcaaaatccagca
tccctcgccacggtcactcccacacagtgtaatggtcctgcacctctgcctctgctgcag
cctcacatcctgcctacagcctcgcccgcaccctctgcaggccaaaaagcagtcacgcaa
gtacagtacatcctgcccacgctctctgccaacaaccccaagagcccctcccctcagctt
cccagccagccaaccagtatcttcaccctgcctacagctccacccacacttgcttcagtg
gcaaatgggaagcagtcagcatatacctctggccctgcagtaggcatggtcagtccagga
gctagagtgcaaacacagtccccagtcttacatggcaagatgctggttcccatggcaact
gtgcggaccactcctgccccttctcagcagtttcccctgatggctcctcctcttcctgtg
cagaatggagctcagtcaggaaacaagatcatccagattgcccccatgcctgtcgtgcag
tccccgcttccttcagcagggagtccattccctgtaaccatggcagcagccacagtggtt
gccccaccaggctctaccccctcacaggctgtgctgctgcctcccccacccacgagaatc
acttatgtccagtccactccaggaggcccctcccctatcccgcttgtatccactgcaaca
ggctccgcctcccaaacggcccctccagcacctggatcagcatatgtgccgtctcctttg
gccacctttgcagcgatcgctcattcgggacagaccttagtgcagccacttattgctggt
caacctcctttgttagcaccgccccagtctcccaacccagccatcacagccatctacccc
tctgccaccgtcaccctggcgacaggggtggtgtctccagcaacagtgccacctggcgtg
gtctatacggtctcaagcccttccatccttcccaaacacacttccaccacttctgtgaca
cctacgaccctgacggcccctgacaggcccggtcacggtcctgcacacgctgagctggac
agacagacagacaaaccacttctctctcatactgacaggctgactaaagttggcagtagc
tcaacggctccaccgcctggtgcgacattgcctctacagcctgccagtccagctcagcca
ccacttgcagctgccatttctaaaccagccaggcctccgcagaaggtcaaggccaccgtg
gccaacatccccgtcggctgctacgatggaggagggagagggaaagagcgcgagaaagac
agagagaaagagagggaacgtgagaaggagaaagagagcagcagctgtttctcctttgag
gtggataaatcaggagaaatgactgctgctgctcccacctcgctagacgatggctcttcg
gaagctgaagctcataacgttggtgaagttggttccacaagcacacgcagcaaagagtcc
aatgctaaagaggctgaatggaaagactctacttcctcttctccattacctcaatcagcg
tcagagcctgccccaccccttccgcagtcagacaaagatactcctcttcctaaaaagctt
aagtcccgccccccaccactgaagcgcccattcgactcagttgacaaagtcctgtcagag
gtgtactttgaggagcgatttgctgagctgccagagtttcgtccagaggaggtgcttccc
tcgccgaccctacagagcctggccacctctccacgcgccattctgggcagctaccgcagg
aagaggaagaactcgaccggtgagagagatttagactcctccacggatgaccccatttcc
ccgaagagaaagagccggcgcaggtctagctgcagctcagaacctaacacacccaaaagc
gctgccaagtgtgagggtgatatatttacctttgataggccaggtacagatggggaggac
atactgggcgagctggaatttgataaggtgccatactcctctctgagaagaactctggat
cagaggagagctctcgtcatgcagctgttccaggagcatggcttcttcccttcagcccag
gccactgctgcattccaggcacgatatgccgatatcttccctaccaaggtgtgtttgcag
ttgaagatccgcgaggtccgccaaaagatcatgcaaacggctgcgcccagcgaaatcgca
ggcacttctgactctgcctctttaccgggcccatctgggcccgcagccaacgagggagtt
ggcgggtccgggtctgcagaaaaagaggcggagcgagacgaggagcaaaacaactctgaa
gagcccaggaacgcaggcgattcactggactccaccagatga
DBGET
integrated database retrieval system
