Ictalurus punctatus (channel catfish): 108266393
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Entry
108266393 CDS
T04658
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108266393
03009 Ribosome biogenesis [BR:
ipu03009
]
108266393
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108266393
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
90S particles
RNase
108266393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
108266393
NCBI-ProteinID:
XP_017325088
Ensembl:
ENSIPUG00000023749
UniProt:
A0A2D0R3B0
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All DBs
Position
6:complement(18449067..18457137)
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AA seq
574 aa
AA seq
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MKIAVEGCCHGELDKIYETIGYLERKEGIKVDVLLCCGDFQAVRNEGDLKCMAVPLKYRH
MQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGVVRYRGIRI
GGLSGIFKTHDYRKGHYEFPPYSQETLRSVYHIRNSDVFKLKQIRMPMDVFMTHDWPRGI
YHYGSTEQLLRKKKFLREEVESGTLGSPAAAELLNHLQPGYWFSAHLHVKFAAVMQHEAR
GNAAPKTTKFLSLDKCLPHRDFLQVVEIADRPGSSEKLEYDPEWLAILKATTRLQKPSPN
IWHPPENNGLHTRWDYSASEEAMMEIVSALNGELSIPENFSPTVPAYDPSRPQPHAPPAY
CTNPQTTELCATLSLVDIYALAGQSAQNSTSWREEGANEEEDEDNQSSGSVDEPSEYPTD
TSVLSSSYNPDEITIEDEWEEEEEEEEVEEKDGGEVKKPGTDAVVPEAPVGVQDSDRDSS
PQREAMGRLVLPPPRTASKSDEASDLPLRLPPPSTPFSSCFSQTSSEEEGATPPARVPKR
PSGETKGSFTPTGSTPRIKRRNQTIYAAADDEES
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcagtggaaggctgctgccatggcgagctggacaagatctacgagaccatt
ggctacctggagcgtaaggaaggcattaaggtggatgtgctgctgtgctgtggggatttc
caggctgtgaggaatgagggagatctgaagtgcatggcagtgccactcaagtacaggcac
atgcagaccttttacaagtactattcaggagagaagaaagcgccagtcctgaccatcttc
atcggtggcaaccatgaggcttctaaccatctacaagagcttccctatggaggctgggtg
gccccgaatatatactatttgggttacgctggcgtcgttcgctacagaggtatacggatc
ggtggcctttcagggatttttaaaacgcacgattacagaaaaggacactatgagtttcca
ccatacagccaagaaaccctgcgcagtgtctaccacattagaaacagcgatgtctttaag
cttaaacagatccgcatgcccatggatgtgttcatgacgcacgactggccgaggggcatc
taccactacgggagcacggagcagctgttgaggaagaagaagttcctgcgtgaggaggtg
gagtcaggcacactgggaagtccggccgccgctgagctcctcaatcacctgcagcccggc
tactggttctctgcacatctacacgtcaaattcgctgccgtgatgcagcacgaggccagg
ggaaatgctgctcctaagacaaccaagttcctctctctggacaagtgtcttcctcatcga
gacttccttcaggtagtggagatcgcggacagacctggctcctctgaaaagctggagtat
gacccggagtggttagccatcttgaaggccactacccgccttcagaaaccctcaccaaac
atctggcacccgcctgagaataacggccttcacactcgttgggactacagtgcatcagag
gaagccatgatggagatagtgagtgctttaaatggggagctcagcatccctgagaacttc
agtccaacggtgcccgcttatgacccttctcgccctcagccccacgccccaccggcctac
tgcaccaacccccagaccacagagttgtgtgccaccctcagcctcgtcgacatctacgct
ctggcaggccagagcgcacagaactctacgtcctggagagaggaaggagcaaatgaagag
gaggacgaggacaaccagagctcaggtagcgtagatgaacccagcgagtaccccactgac
acctcggtgctctctagctcctacaaccctgacgagattaccatcgaggatgagtgggaa
gaggaggaggaggaggaggaggtggaggagaaggatggaggggaggtaaagaagcctgga
acagatgcagtggttcctgaggctccagtaggagtgcaggacagtgatagggacagcagc
ccccagcgagaggccatgggcaggcttgtcctaccacctcctcgcacagcatcaaagagt
gatgaggcctcagatttgccccttagacttcctccaccttctacaccgttctcgagctgt
ttctcccagacgagctcagaggaagagggggccacgccaccggccagagtgcccaagcgg
ccgagtggagaaaccaagggatcattcacccccacaggcagcaccccccggatcaaacgg
cgcaaccagaccatctacgcagcagctgacgacgaggagagttag
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