Ictalurus punctatus (channel catfish): 108266394
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Entry
108266394 CDS
T04658
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108266394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108266394
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
108266394
Prokaryotic type
Archaeal type
TFE
108266394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Phage_zn_bind_3
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
108266394
NCBI-ProteinID:
XP_017325089
Ensembl:
ENSIPUG00000023774
UniProt:
A0A2D0R3B6
LinkDB
All DBs
Position
6:complement(18359861..18417934)
Genome browser
AA seq
441 aa
AA seq
DB search
MTEPEVLTEVPAALKRLAKQVVRGFYGIEHALALDVLIRNACVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFHCPNCCSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVNLSHELLEPEPTEIPALKQSRERAAASGGPAGAGMAGQDVWRT
KGSSYADMYTQNVVINMEEQESQQAQAAEARPHKERPVWLTQSTVQGAYNENDALKAAGE
DSMVTQEGLTGRGHVQDENEEVMRALLIHEKKSAAAPAGGAVHRTPIPAANASDSESDTS
ESDEDSPVRAIAAPPKPGRQDEDEEDDEFEEVGDEPVVMVGGRAYSYREVSQRPELVEKM
SAQEKEAYIEMGQNLFQDMFF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccggaggtgctgaccgaagtcccagcggcgctgaagcgcctggccaagcag
gtggtgcgtggtttctacggcatcgagcacgctctggccctggacgtgctgatccgcaat
gcctgcgtgcgtgaggaggacatgctggagctgctcaagtttgaccgcaagcagctgcgc
tccgtgctgaacactctgaaagccgacaagttcgtcaagtgccgtatgcgcgtggagacg
gcgccggacggcaagaccacgcgccacaattactacttcatcaattacaggctgctggtc
aacgtggtcaagtacaagctggaccacatgcggagacgcatcgagacggacgaacgcgac
tctaccaacagggcgtcgttccactgtcccaactgctgcagcacattcaccgacctggag
gccaaccagctgtttgacccaatgacagggacgttccgctgtacgttctgccagaccgag
gtggaggaggacgagtcggccgtgccgaagaaagacgcgcggacactggtcgcccgcttc
aacgagcagatcgagcccatttacgtgttgctacgagagactgaagacgtcaacctgtcg
catgagctactggagccagagcctacagaaatccctgctctgaaacagagtcgggagcgc
gcggctgcatccggaggtccggcgggggctggaatggcaggtcaggacgtctggaggacg
aagggctcgtcatatgcggatatgtacacgcagaatgtcgtgatcaacatggaggagcag
gagagccagcaggcccaggctgccgaggccagaccccacaaagagaggccggtgtggctg
actcagagcaccgtgcagggagcctacaacgagaacgatgccctcaaggccgctggcgag
gactccatggtaacccaggaaggtttgactggacgtggccacgtgcaggatgagaacgag
gaagtgatgcgtgctctcctcatccacgaaaagaagagtgcggctgcaccagcaggcgga
gccgtccacaggacacccatcccggcagccaatgccagcgactcggagagcgacaccagc
gaatcggacgaggactcgcccgtccgggccatcgccgctccaccgaagccgggcagacag
gatgaggacgaggaggacgatgagtttgaggaagtgggagacgagccggtggtgatggtg
ggagggagagcgtactcctacagggaagtgagccagaggccggagctggtggaaaagatg
agcgcccaggagaaggaggcctacattgagatggggcaaaacctcttccaggacatgttc
ttctga
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integrated database retrieval system
