Ictalurus punctatus (channel catfish): 108266414
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Entry
108266414 CDS
T04658
Name
(RefSeq) basal cell adhesion molecule isoform X2
KO
K06578
basal cell adhesion molecule
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108266414
04090 CD molecules [BR:
ipu04090
]
108266414
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Other
108266414
CD molecules [BR:
ipu04090
]
Proteins
108266414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
C2-set_3
Ig_5
C1-set
C2-set
Amnionless
Orf78
Motif
Other DBs
NCBI-GeneID:
108266414
NCBI-ProteinID:
XP_017325154
Ensembl:
ENSIPUG00000002859
UniProt:
A0A2D0R3K7
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All DBs
Position
1:7904020..7959126
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AA seq
598 aa
AA seq
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MERMISGRVWLACVSLFFTLQVCLASVSVKVTPTVDVIIGETARLPCSYSTTGAMAVVQW
FIESAGTRKRVAFRSSTGVGLDKDTPLTDRVTMETDMTLVISPVKVMDERSFFCQVDGGP
VGTSEAETKLMVFFAPEKPVVSENTQIIPLTPNNPVAHKVGKCTSNNGHPEPRIIWFKDS
KPLPEVTDPKEKIYMVPSVVKESSGLFTVTSTLYIQPEKIDAKSVFHCTAEYSMPNGDIK
KENSEPFNLTLLYPAENVFFKLLNTSQIKEGDDVQMKCETDGNPQPQFEFTKDGRTLASG
TGLFILRNVTRSDSGTYTCEAQDFDADNVELTKTLTITVHHLDPVSVVPASPLMIKKGDQ
AELQCKTRSSDEYTLSWMKDGKQLLQKGVLTLLSANLGDAGEYVCVALVPSVPGLRKQAN
ITVIVSGSPEIGEPMPGKVEKQGSMVTLRCSAQGYPAPQFVWKPSGKVSLDVNGNTFTST
VTLEATAAVIKDGVTCEVTNMHGADSKKIMVEIQSDNTVEQDNGVKADTQQGGSKGVVAA
VLVCVLLLLLLVAALYFLSKRGRMACRKKEVKEVAPGEEMKSGKNEESGLLNKPPVEP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagaggatgatatcaggacgcgtgtggctcgcttgcgtttctcttttcttcacactg
caagtgtgtctggcttcagtgtcagtgaaggtgactcctacagtggatgtgattatagga
gaaactgcccggctgccctgctcctactccaccactggggccatggccgtggtccagtgg
ttcattgagtctgcaggcacacggaagcgtgtagctttcaggtcatccacaggtgtcggc
cttgataaagatacaccgttaacagaccgtgtcaccatggaaactgacatgaccctagtc
atctctccagtaaaggtgatggatgagaggagcttcttctgccaggtggacggaggacct
gtgggtacctcagaggctgagaccaaactcatggtgttctttgctccggaaaagccagtg
gtgtctgaaaatacccaaatcattcctttaaccccaaataacccagttgcacataaggtg
ggcaaatgcaccagcaacaatggtcaccctgagcctcggatcatctggtttaaagactcc
aaacctctgccagaagtgaccgatcctaaagagaagatatacatggtcccgagtgtggtg
aaggagtcctcaggtctcttcacggtcacaagcactctgtacatccaacccgagaagatc
gatgccaagtcagtgttccactgcaccgcggagtacagcatgccgaacggggatatcaaa
aaggagaactcggaaccgttcaacctcacgctgctctacccagcagagaacgtgttcttc
aaattgttgaacacgtcacagatcaaagagggagatgatgttcagatgaaatgtgagacg
gatgggaaccctcagcctcagttcgagttcaccaaagatggaaggacactagcaagtggg
acgggattgtttattctgcgcaatgtcactcgcagtgactctggtacctacacgtgtgaa
gcacaggactttgatgcagataacgttgaactgaccaagaccctcaccatcactgtgcac
catctggacccagtatctgtggtgccagccagccctttgatgattaaaaaaggtgatcag
gctgagcttcagtgcaagaccaggtcttctgatgagtacaccctttcatggatgaaggat
ggtaagcagctgcttcagaaaggtgtcctgactctgctgtccgcaaatctgggcgatgct
ggcgagtatgtgtgtgttgcattagtcccctcagtgccgggcctgaggaagcaagctaat
atcacagtaattgtctcaggttcacctgagattggtgagcccatgccagggaaggttgaa
aagcagggtagtatggtcactctgaggtgttctgctcaaggctatcctgctccccagttc
gtctggaaaccctctggcaaagtgtcattagatgtaaatggaaatactttcaccagcaca
gtcaccctggaggccacagctgccgttatcaaagatggcgtcacttgtgaggtaaccaat
atgcacggtgcagacagcaagaagatcatggtcgaaatccagtcagacaacaccgtcgaa
caagataacggtgtaaaagcagacactcagcagggtggctctaaaggagtggtggccgct
gtgttggtgtgtgtcctgctcctgctcctgctggtggctgctctttatttcctcagtaag
aggggaaggatggcctgtcgcaagaaggaggtgaaggaagttgcgcccggggaggagatg
aaatccggcaagaatgaggagtcagggctgcttaataaaccccctgtagagccgtga
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