Ictalurus punctatus (channel catfish): 108266421
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Entry
108266421 CDS
T04658
Symbol
lrrfip1a
Name
(RefSeq) leucine-rich repeat flightless-interacting protein 1 isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266421 (lrrfip1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Other transcription factors
LRRFIP
108266421 (lrrfip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
Motif
Other DBs
NCBI-GeneID:
108266421
NCBI-ProteinID:
XP_017325167
Ensembl:
ENSIPUG00000000578
UniProt:
A0A2D0R3J3
LinkDB
All DBs
Position
6:complement(9017975..9080065)
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AA seq
1415 aa
AA seq
DB search
MASQGPGRKRTPNRNAVTPEEDALNVIAKEAEARLVAKRAARAEAREIRMKELERQQKEI
YQVQKKYYGLENLDNKWGDIEQWMEDSERYTRHSQRHVSVSDDEECMSVGSRSSVRLDLD
SVGAQAGLSHTLYSHSHKSTKKKKKRTKHSSDISNGYNNGYSTISSRGSLYENSLCSNSL
RSSTRTLSEYSGHLGSSSRTSSRASSRCASPVENSSSSVASILRKAASSSGLSRDLDHVT
IPDMPNLDDSLDRDFFEKGSSRASTLSNATLTSLGGASSRKGSGSSSVTADTEASIQDIK
EIHELKDQIHDVEAKYMQSLKEIKDSLADMEGKYRKAMVSSAQLDNEKSNLMYEVDTLKD
SLMELEELLAETRRECEEKSKDLEREKHAHSILQFQFSEQKEALKQSEELLTEIRHLHIK
QEGFVREISDLQETIEWKDKKIGALERQKEFSDAIRNERDELRDEVVQLKDILKKHGIVL
GPDLRTNGEVEENVTGGSACTELQQGSSVLGTQELQLFRGENVGGSRGGQFQHPKDFDHG
IQENHLPTSASGNSSESLLVAQNDVGLGNYINNSTEKIQINVEKPQNVFAVEAEEQVVLE
ISKGNDVAPEPVAIIMEDMRTDQQESSLYVKRSETIKEGNTDSTEKSTCEISEKDGDHLD
ETVAGDSQIRMVSDSLPSAKIDTTSHSQSASVSGKKKKKKKKSKQKQKHSCDEKEVHSEI
GDKNENQLIESSSVQTVESVSEYNTLHSEEATINEKVSVNVNIDERTDLMQKAAESLELQ
SPNTGPGNILGPIINWTDCTSSTDSIPPLDSKTEINIEIPTYGFPLEITTGELNASNGKY
KLLSNTDDAVAVCADFPDSENSSEVNLEKDITETTKDVVKIETIDEIIQLDETSVETSTD
TQLGETLGPAEVLKEEQETSRETQQGDTLDTAEVPKEEQETDTQLGNILDTAEVPKEEQE
TSTDTQLGDTLYPAEVPKEEQETFRDTQLGNTLDTEEVPKEEQETSTDTQLGDKLVTAEV
PKEDQETDTQLGNILDTAEVPKEEQETSTDTQLGDTLYPAEVPKEEQETFRDTQLGNTLD
TEEVPKEEQETSTDTQLGDKLVTAEVPKEDQETDTELGDTLVTAEVPKEEQETSRDTQLG
EALVTAEVPEQEQETSTETQLCEALVTAEVPKEEQETSRDTQLGDTLVTAEVPEQEQESQ
EPTRIDQEFSVEEDVGEVESGESFEFNMEVNGSEGNLLGDTECQQEHKSISRYTEQSCTT
SEPQELADAEEGHEDQKLQTDEQNVSIERDKGVDQIATTENDHNKCQQQFITGKDEQGSQ
DHEEIIHVEHYESAKQETSPANLVQVLDDPLPETGELDQEASSVIPQEEGQNMGEQEIRE
FKEGTSKRNKEDAKNGSKKESKKGKGKTKEDCKMS
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaggggccgggacgcaagagaactcccaacagaaatgcagtgactccggag
gaagatgcgttaaatgtgatcgcaaaagaggctgaggcgcggctggtagctaagagggct
gccagggcagaggctcgtgagatccgcatgaaggagctggagagacaacaaaaagagatt
tatcaggtccagaagaaatactatggactggagaacctggacaacaaatggggggacatt
gagcagtggatggaggatagtgagcggtatacacgccactcacagagacatgtttcggtg
tcagatgatgaagaatgtatgtcagtggggagcaggagcagtgtgcggttggatttggat
tcagttggtgcacaggctgggctatcccatacattgtattcacattctcacaagagcaca
aagaagaagaaaaagaggacaaagcactcttcagatattagtaatggctacaacaatggt
tacagcacaatttccagtcggggatctttatatgaaaacagtctctgcagtaactctctg
cgctccagtacccgtactttgtctgagtatagtggccatttgggctcaagctccagaacc
tcatccagggcgagttccagatgtgcaagcccagtggaaaatagcagcagctcagtggcc
agtattttgcgaaaggcagctagcagcagtggcctttccagagacttggatcatgtgacc
attcctgatatgccaaacttggatgactcattggacagagatttttttgagaagggttcc
tctcgagcatctactttatccaatgctactctgacttcactgggcggggcttcctcacgc
aaaggaagtggcagttcatctgtcactgcagatacagaggcatccatacaggatattaag
gagattcatgaacttaaggatcagatccatgatgtggaggccaagtacatgcaaagcctc
aaagaaatcaaggattctctggcagacatggaggggaaatatcgcaaggctatggtgtcc
agtgctcagttggataatgagaaatccaatctgatgtatgaggtggacactttgaaagac
tctctgatggagctggaggagcttttggctgagactcggcgagagtgtgaggagaagagt
aaggatctggagcgagagaagcacgcccacagtatactccagtttcagttcagcgagcaa
aaagaagcattgaaacaaagtgaagagctccttactgagatacgtcatttacacatcaaa
caagagggctttgttagggagatttctgacctgcaggaaactattgaatggaaggataaa
aaaattggggccttagaaagacagaaggagttttctgatgccattcgaaatgagcgggat
gaactcagggatgaggtggttcaactcaaagacattttaaagaaacatggcattgtcctt
ggaccagacttgcgcaccaatggggaagtggaagaaaatgtgactggtggatcagcctgc
actgaattgcaacaagggagcagtgtattaggcactcaggagttgcagctgtttagaggt
gaaaatgtagggggctccagaggtggccagttccaacacccaaaggattttgaccatgga
attcaagagaatcacctgcctacatctgcctctggcaattcttctgaatctcttttagta
gcacaaaatgatgtgggtcttggaaattatataaataacagcacagagaaaatccagatt
aatgttgaaaaacctcagaatgtttttgcggttgaagcagaggaacaagttgtattggaa
atttcaaaaggtaatgatgtagcaccagaacctgttgcaattattatggaagatatgagg
acagatcagcaagagagttcactgtatgttaaaagaagtgagactataaaagagggaaat
actgattccacagaaaaatccacctgtgagatatcagaaaaagatggagatcacctagat
gaaactgtggctggagattctcagatcagaatggtttctgacagtttgccatcagcaaaa
atagatacaacatcacattctcaaagtgccagtgtttcaggaaaaaagaagaagaagaaa
aagaaaagtaaacagaaacaaaagcatagttgtgatgaaaaagaggttcattcagaaata
ggggacaagaatgaaaaccagctcatagagagcagttcagttcagactgtagagtcagtt
tcagagtataacactctacattcagaggaagcaacaataaatgagaaagtttcagttaat
gtgaatattgatgaaaggactgacctgatgcaaaaagcagcagaatccctagaactacaa
agccctaatactggccctggaaacattttaggaccaatcattaattggactgattgcaca
agcagcactgactccatcccacctttggactccaaaacagaaattaatattgaaatccct
acttatggctttccattggaaattactactggtgagttaaatgcttctaatggcaaatac
aaattgcttagcaacactgatgacgctgttgctgtctgtgctgattttcctgactctgaa
aactcttctgaggtaaaccttgagaaagatataactgaaactaccaaagatgtagtaaaa
atagaaacaattgatgagattattcaacttgatgaaaccagtgtagaaacatccacagac
acacagctgggtgaaacattaggtccagcagaagtactaaaagaagagcaagaaacgtcg
agagagacacagcagggtgacacgttagatacagctgaagtaccaaaagaagagcaagaa
acagacacacagctgggtaacatattagatacagcagaagtaccaaaagaagagcaagaa
acatccacagacacacagctgggtgacacattatatccagcagaagtaccaaaagaagag
caagaaacattcagagacacacagctgggtaacacattagatacagaagaagtaccaaaa
gaagagcaagaaacatccacagacacacagctgggtgacaaattagttacagctgaagta
ccaaaagaagatcaagaaacagacacacagctgggtaacatattagatacagcagaagta
ccaaaagaagagcaagaaacatccacagacacacagctgggtgacacattatatccagca
gaagtaccaaaagaagagcaagaaacattcagagacacacagctgggtaacacattagat
acagaagaagtaccaaaagaagagcaagaaacatccacagacacacagctgggtgacaaa
ttagttacagctgaagtaccaaaagaagatcaagaaacagacacagagctgggtgacaca
ttagttacagctgaagtaccaaaagaagagcaagaaacatcgagagacacacagctgggt
gaagcattagttacagctgaagtacctgaacaggaacaagaaacatccacagagacacag
ctgtgtgaagcattagttacagctgaagtaccaaaagaagagcaagaaacatcgagagac
acacagctgggagacacattagttacagctgaagtacctgaacaggagcaagaatcacag
gagccaacacgcatagatcaggaattcagtgtagaagaggatgtaggtgaggtggagtct
ggagaatcttttgagtttaatatggaggttaacgggtcagaaggaaatttgcttggagat
actgagtgtcagcaagaacacaaaagcatttccaggtacacagagcagtcttgtacaacc
agtgaaccacaggagctggcagatgctgaagagggacatgaagaccaaaagttacagaca
gatgaacagaatgtctcaatagaaagagacaagggtgtggatcagatagccacaacagag
aacgatcataacaaatgtcagcaacaatttataacaggaaaagatgaacaaggatctcaa
gaccatgaagaaatcatacatgttgagcactatgaaagcgccaagcaggaaacaagtcca
gcaaatcttgtacaggtccttgatgatcctcttcctgagacaggagagttagaccaggag
gccagtagtgtcattccacaagaagaaggtcagaatatgggagagcaggaaatcagggag
ttcaaagagggtacatctaagagaaacaaggaggatgcaaagaatggctccaaaaaggaa
agcaagaaaggaaaggggaagactaaagaggactgcaaaatgtcttaa
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integrated database retrieval system
