Ictalurus punctatus (channel catfish): 108266456
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Entry
108266456 CDS
T04658
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266456
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
108266456
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
108266456
NCBI-ProteinID:
XP_017325288
Ensembl:
ENSIPUG00000023554
UniProt:
W5ULQ4
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Position
6:complement(20381294..20391414)
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AA seq
456 aa
AA seq
DB search
MSKSEAEEMIEIEIDGQEKQECLEEGIEEQTITASDLITQDIDINEPVGNLKKLLEPRLQ
IALDGYDICLQDIHLHPDHSLFDQGVKTDGTVQLSVQIVTKPGEEKLNILEIVKPVETVE
VVIDPDAATGEEAHLVEDGQMIAVERAAIADETSEQVTRWAAALEGYRKEQVRLSIPYDP
VQWTADQVIHWAVWVMKEFNIEEIEVGGIHIPGRQLCAFSQEEFLQRVPNGEILWSHLEL
LRKYVLASQEQGQEATVTIDQPVQIIPAPVQQVTPTTIKVQKHNKVPRAPRISGEERSSP
GNRTGNNGQIQLWQFLLELLTDKDARDCISWVGEEGEFKLNQPELVAQKWGQRKNKPTMN
YEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNSLVTECEQKKLARVQ
LHGIGQPVSTVALATAAGQPVTTVTLATAATLEKDS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagtgaggctgaggagatgattgagattgagattgatggacaagaaaaacaa
gaatgcctagaagaaggaatcgaggagcagaccatcacagcgagcgatctcatcactcag
gacatcgatatcaatgagcctgttggtaacttgaagaagttgctggagccccgactacag
attgctctggacggatatgatatttgtctgcaggacatccacctgcaccctgaccacagc
ctttttgaccagggtgtgaagactgatggcacagtgcagctcagtgtgcagatcgtcacc
aaaccaggtgaggagaagttgaacatactggagatagtaaagccagtagagacagtggag
gtggtgatagatcctgacgcagccacaggagaggaggctcacttggtggaggatggtcag
atgatagcagtggagcgagctgccattgcagatgagacctctgaacaggtgacccgatgg
gcagccgcactggagggctaccgcaaggagcaggtccggctcagtattccttatgacccg
gtgcaatggacggcagatcaggtgatccactgggccgtgtgggtgatgaaggagttcaac
attgaggagattgaggttggaggcatccacatcccgggtcggcaactgtgcgccttcagt
caagaggagtttctccagagagtgcccaatggagagatcctttggagccacctggagctg
ttgcgcaaatatgttctggcaagtcaggagcagggacaggaagctacagtcactattgac
caacctgtgcagatcatccctgcgcctgtacaacaggtcacacccacaaccattaaggtg
cagaagcataacaaagtgccccgagctccacgcatctctggagaggagcgcagttcacct
ggaaaccgtacaggtaataatggacaaattcagttatggcaattcctgctagagctgctg
actgataaggatgccagggactgcatttcctgggttggggaggagggcgagttcaaactc
aaccagccagaactggtggctcagaaatggggacagaggaagaacaaacccaccatgaac
tatgagaagctcagcagagccctcagatactactatgatggagacatgatcagcaaagtg
cagggcaagcgcttcgtctacaaatttgtttgtgacctgagaactctgattggctacagc
gctgctgagctcaacagcctggtgacggagtgcgagcagaagaaactggcccgggtgcag
ctgcatggcatcgggcaacccgtcagcacagttgccctggcaacggccgcaggacagcca
gtcaccacagtcacgctggccactgctgccacactggagaaggacagctga
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