Ictalurus punctatus (channel catfish): 108266463
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Entry
108266463 CDS
T04658
Symbol
appb
Name
(RefSeq) amyloid beta (A4) precursor protein b isoform X1
KO
K04520
amyloid beta A4 protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108266463 (appb)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108266463 (appb)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108266463 (appb)
Peptidases and inhibitors [BR:
ipu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
108266463 (appb)
Proteoglycans [BR:
ipu00535
]
Cell surface proteoglycans
Others
108266463 (appb)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Others
108266463 (appb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
HTH_Tnp_Mu_1
DUF3792
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108266463
NCBI-ProteinID:
XP_017325302
Ensembl:
ENSIPUG00000023561
UniProt:
A0A2D0R3X0
LinkDB
All DBs
Position
6:20343955..20380784
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AA seq
756 aa
AA seq
DB search
MGEWTAFVLLIAATLSLAVEVPSDDSVGLLAEPQVAMFCGKLNMHINVQSGKWEPDPTGT
KSCIRTKEGILQYCQEVYPDLQITNVVEANQPVSIQNWCKKGRHQCRSHVHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDFGMLLPCGIDRF
RGVEFVCCPLEEQRDSEAEEQEEVNSDVWWGAAENEYTDSLPKQAPTEQQELESVNVDVD
EDIGDDVEEGWENDEDGDGVEDDEEDDEDEDAINERDTSEQASNVAMTTTTTTTTESIEE
VVRAVCWAPARKGPCDAKLPRWYFVAETGRCAPFTFGGCGGNRNNFESEEYCMAVCSSSV
LPTMAPSPPDAVGRYLEAPGDVNEHAHFQKAKERLEAKHRERMSQVMREWEEAERQVKSL
PRADKKAVIQHFQEKVEALEAEAANERQQLVETHIARVEALLNERRRMALDSFLTALQAD
QPRPRQVLGLFKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQVLAHLHVIEERLNE
SVAYLYKVPQVTNEIQGQVALLLVRLQAEATQQLSSVQSDMRVSYGNDALMPPDSTPSVD
SVVVEQDNLGFIHPESFNQANTDNHVEPVDARPVPDRGLPTRPVSGLKPDEMPEVRMDIE
ERHSTGYEVHHQRLVFFADDVSSNKGAIIGLMVGGVVIATIIVITLIMLRKKQYSSIHHG
VIEVDAAVTPEERHLTKMQQNGYENPTYKFFEQMQN
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaatggacggcctttgtgctgctgatagctgcgactctgtcgcttgctgtcgag
gtgccatcggacgactcggtgggattgctggccgagcctcaggtggccatgttctgtggg
aaactcaacatgcatatcaacgtccagagtggaaagtgggagcctgatcctactggcacc
aagagctgcatcagaaccaaggaaggaattctgcagtactgccaggaggtgtaccctgac
ctgcagatcactaatgtagtggaggccaaccagccagtcagcatccagaactggtgcaag
aagggcagacatcagtgccgcagccacgtacacattgtagtgccctatcgctgcctggtc
ggagagtttgtgagcgatgcccttctggttcctgacaagtgtaaattcctacaccaggag
cggatggatatgtgtgagagccacctgcactggcacactgtggccaaagagtcatgtggt
gatcgttcgatgaatctgcatgactttgggatgctgttgccatgcggtattgaccgtttc
cgtggtgtagagtttgtgtgctgcccgctggaggagcagagagactctgaggctgaagag
caggaggaagtcaactcggacgtctggtggggagccgctgagaatgaatacactgacagc
ctgcccaaacaagcccctacagaacagcaggaactagagtctgtcaatgtggatgtagat
gaagacataggagatgatgtagaagagggctgggagaatgatgaggatggtgatggtgtg
gaagatgatgaggaagacgatgaggacgaggatgctataaacgaacgtgacaccagtgag
caagcttcaaatgttgccatgaccaccaccactactacaaccactgagtctatagaagag
gttgtgcgagccgtgtgctgggctccggcacggaaaggcccgtgtgacgccaagctgccc
cgctggtactttgtggccgagacaggacggtgtgctcctttcacctttgggggctgcgga
ggcaaccgcaataactttgaatcagaggagtactgcatggctgtgtgcagcagcagcgtg
ttgcccactatggctccgagcccccccgacgccgtgggccgctacctagaggctcctgga
gatgttaacgaacatgctcacttccaaaaagctaaagagcgtctggaggccaaacacagg
gagaggatgtcgcaggtgatgagggagtgggaggaggcggagaggcaggtgaagagcctt
ccccgtgctgataagaaggctgtcattcagcatttccaggaaaaggttgaggcattggag
gcagaggcagccaatgagaggcagcagctggtggagactcacattgctcgggtagaggct
ctacttaacgagcgccgacgtatggcactggacagcttcctaactgcactacaggctgac
cagccccggcctcgtcaggtgcttggcctgtttaaaaagtatgtacgtgccgaacagaag
gacaggcagcacacgcttaaacattttgagcatgtacgcatggtggaccccaagaaagct
gcccagatccgccctcaggtgctagctcacctgcatgtcatcgaggagcgtctgaatgaa
agcgtggcttacctctacaaggtcccacaggtgaccaatgaaatccagggccaagtggcg
ttgctgctggtgcgtttgcaggccgaggccactcagcagctttcctctgttcagtcggat
atgagagtgagttacggtaacgacgctttgatgccccctgacagcaccccatctgtggac
tctgtggtcgtagagcaggacaacctgggcttcatccaccctgagagcttcaaccaagcc
aacactgacaaccatgttgagcctgtagatgcccgtccagttccagatagaggacttccc
acacgacccgtgtctggcctaaagcctgatgagatgccagaggtacggatggacattgaa
gagaggcacagcactggatatgaagtgcatcaccagagattggtatttttcgcagacgat
gtaagctctaataagggagccataatcggcctaatggtaggcggagtcgtcatcgctacc
atcattgttatcaccctcataatgctgaggaagaagcagtactcctccatccaccatgga
gtcatagaggtcgatgccgcagtgactccagaagaacgccacctcactaagatgcagcag
aacggctatgagaaccctacctacaagttcttcgagcagatgcagaactaa
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