Ictalurus punctatus (channel catfish): 108266507
Help
Entry
108266507 CDS
T04658
Symbol
fhip1b
Name
(RefSeq) FHF complex subunit HOOK interacting protein 1B
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266507 (fhip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108266507 (fhip1b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
108266507 (fhip1b)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
108266507 (fhip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
TAF4
Motif
Other DBs
NCBI-GeneID:
108266507
NCBI-ProteinID:
XP_017325415
Ensembl:
ENSIPUG00000012196
UniProt:
A0A2D0R6H3
LinkDB
All DBs
Position
6:complement(2751643..2765089)
Genome browser
AA seq
1265 aa
AA seq
DB search
MRCVGVWSGVGYRPDDIAELSQSPHSDRPVTVTTLAEDTSGTPPFLCSHLPFSRVHLYTL
CLWQLCITCSLPSPLSLSSPLLSSLLLFPSSSFSFFPPFLSSDLFPLSWKSPSSGIPTLG
REAKMSWLSRITPRGPDGRNSRNVAPSSPCTADPETCLMVFENHWRQVSWVLEQRDSVAG
AADDLTAVRNHTDQMLCLLAEERPAGGDRDPPALGPILELVVSENILERLVQWHVRRGLD
PDSQTALLKLFEMLIGQSPQPLLQNSAVLQPLLILLGACVDPQLGCPPNLEASLVLLLNQ
VCVSMARQPAVLELLFRCGTIQQGPTNLLIFSLLVPFIHRDGALGQQARDALLLVMATSA
SNHAVARYITENSYFCPVLATGLSALYSSLPRKIEVRGDDWHALRREDWMGVSSLVLFMN
SLEFCNAVVQVAHPLVRCQLIDYLHNGFLVPVMGPALHKSSVDEMIASTAYLDLFLRSVS
EKSLLKTFLRFILLHRHDNDTILDTLLTRISSNSRLCMVSLSLFKTLLSLNCEDLMLQLV
LRYLLPCTHVMLSQRRAVRETDLYGKSADKFLSLIPECCRITTAACNEREEEPAFWGKVL
GSPTSESPVHTKPSTPSRLALFIRQQNTGNPSSTAASDNTPSSPRGSISTPAPNSPMHQP
PDASEAESGYLEYLRDARRGIELCSWACRDWSAPYDGENPSPNSAPPPPPPPTSNPSLNM
VPEHFSMQQTGLKDIQQRAATVAAARAEWSSSDRNSGEWDVTISKNCISLTPRSKKRSLL
PSSVSLQPSSSSSSSSAVPPSGPGEPAGHQPHTLPHRALFNGTGQADECADMSDRGMEVK
KVKRDADASGGVEELGVNGRVGIVSPESSLPLQREYSSVTKPSQVQSTTLPQPQTSPAGL
QSSSQECSSSEGKRSTPASSSAETFITTSCSSPGPESVESLIDELLEQAPSEPLSEDANG
QGISIEAFHQELRELEERVKGRRVPKRSTDEFIQDPLCNPADPNRPDEECPSLETEQGTE
ESKPESSTPAMFSPARPLGQPQAQPYIGPFLTVLFSKLENMVQNSLYVNVLLTGIVFQLA
CYPQPLLRSFLLNTNMVFQPSVKSLIQVLGSVKNRIEAFAAVQEDFPAMLRKARRFLVTR
GKLDWTESNAGVPPLRRSDSMVKSRKPSLGELILRHTNSPTRARHAAQAALAHVRDGSHS
LHSALFRGVVAGPGASSLEKQAEALRVKNTVYCAVIFSEFLKELAALAQEHAVAMPFPPS
QGTEE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtgtgggggtatggagtggtgtcggctacagaccggatgacattgctgaactg
tctcagtctccacattctgaccgccctgttaccgtgacaaccctcgctgaggacaccagc
gggactccgccctttttatgctctcacctcccattctctcgtgtgcacctgtacaccctc
tgtctttggcagttgtgtattacttgctcccttccttcccctctttccctctcctctcct
ctcctttcttctcttcttcttttcccttcctcctccttctctttcttccctccctttctc
tcctccgatcttttccctctgtcgtggaagagccccagctcgggaattccgaccctaggc
cgagaagctaagatgagctggctgagtcgtataactcccaggggtccggacgggcggaac
agtcggaacgtcgccccatccagcccgtgcaccgccgaccccgagacgtgcctgatggtg
tttgagaaccattggagacaggtgtcgtgggtgttggagcagagggactccgtggctggg
gcagctgatgatttgaccgcagtgaggaatcacactgatcaaatgctgtgtctactggca
gaggaaagaccagcagggggcgacagggatccaccagctctgggtcctattctggagctg
gtggtgtctgagaacatcctggagcgactggtgcagtggcacgtacgccgtggtctcgac
cctgacagccaaacagctctgctaaagctctttgagatgctgattggccaatcccctcag
cccttgctccagaacagtgccgtgctgcagccgctgctcatcctgctgggagcctgtgta
gaccctcagctcggctgtcctcctaacctggaggccagcctcgtactgctgctcaaccag
gtttgtgtgtccatggcgaggcagcctgctgtgttggagctgttgttccggtgcggtacg
atacagcagggtcccacaaacctgctgatcttctctctcctggtaccgtttatccatcga
gatggggctctgggtcaacaagctcgtgacgccttgcttctggtcatggcgacctccgct
agcaaccacgccgtggcccgctacatcaccgagaactcctacttctgtccggtgctagcg
acgggcctgagcgctctctattcctctctgccacggaagattgaggtgcgtggtgatgac
tggcatgctctacggagggaggactggatgggcgtgtcatctctggtcctcttcatgaac
agtctggagttctgtaacgccgtggtacaggtggcacacccactcgtccgctgccagcta
atcgactacctccacaatggcttcctggtaccagtcatgggtcctgcgctgcacaagtca
tctgtggacgaaatgatcgcaagtacggcgtatctggacctttttctacgaagcgtctcg
gagaagtcgctcctcaagaccttccttcgcttcatactgctgcatcgtcatgacaacgac
accatcctcgatacactgctcacacgcatcagcagcaactcacggctatgcatggtctct
ctcagtctcttcaagactttgctctccctcaactgtgaagacctcatgctccagctcgtt
ctcaggtatctgctgccttgcacacacgtgatgctgagtcagcggcgcgcagtccgagag
accgacctctacggcaaatcagccgataagttcctgtctctcatcccagaatgctgtcga
atcaccacagcagcctgtaatgaaagggaggaggaacctgccttctggggcaaggtgttg
ggtagccctacttcagagtctcccgttcacaccaagcccagcactccatcccgcttggct
ctcttcattcggcagcaaaacacaggcaacccgtcctccaccgctgcttctgacaacact
ccctcctctcctcggggcagcatttccacaccagcccccaacagtcccatgcatcagcct
ccagatgcttcagaagctgagtctggttacctggagtacctcagagatgcacggcggggc
atcgagctctgctcgtgggcctgtcgggactggtcggcaccttacgatggggaaaaccct
tcccccaattcggcgccacctccaccaccgcctcccacatccaacccatctctcaatatg
gtgcctgagcacttctccatgcagcaaaccgggcttaaagacatccagcaaagggcggcc
acggtggcagcagcgcgtgcggaatggagcagctccgatcgaaacagtggagagtgggat
gtgacgatcagtaagaactgcatcagcctcacacctcgcagcaagaaacgaagcctgttg
cccagttctgtctctctgcagccgtcatcatcgtcctcgtcctcatcagcggttcccccg
tcagggccaggagaacctgcagggcaccaaccacacacacttccacaccgagcactcttt
aacggcactggacaggcggacgagtgtgcggatatgtctgacagagggatggaggtgaag
aaggtgaagagagatgcagatgctagtggaggagtggaagaattaggcgtgaatggaagg
gtggggattgtatctccagaatccagtcttcctttgcagagagagtatagttcggtgacg
aagccatctcaggtgcaatctactacgcttccacagccacagacaagcccagctggctta
cagtcctcatcccaggagtgtagctccagcgagggaaaaagatctactccagcctcgagc
tcagctgaaactttcatcaccacgagctgcagtagcccgggaccggagtcggtcgagagc
ctgatcgacgagctgctagaacaagcgccgtctgaaccgctgtccgaagacgccaacggc
cagggcatcagcatcgaagccttccaccaagagctaagagaactagaggagcgagtaaag
ggaaggagagttcccaaacgaagcactgacgagttcatacaagatccgttatgtaatccc
gctgatccgaaccggcccgatgaggagtgcccttcgttggagaccgagcagggaactgaa
gaatcaaagcctgaaagctccactccagccatgtttagcccagcacgacccctcggacaa
cctcaagcacaaccatacataggtcccttcttgacggtgctcttttcgaagctggagaac
atggtacagaattccttgtacgtgaacgttctgctgacgggcatcgtgtttcagctcgcc
tgctaccctcagcctctcctccgctctttcctcctgaacacaaatatggtgtttcagcct
agtgtcaagtctctcatacaggtgctcggatctgtaaagaatcgtattgaagcattcgct
gcagtgcaggaggactttccagctatgctgaggaaggctcggcgctttctcgtcacgcga
ggcaaactagactggacggagtcgaacgcgggagtaccccctctgcgtcgatcggactcg
atggtgaagagtcggaagccgtcactgggcgagctgatactgaggcataccaacagtccg
acgcgggcacgtcacgcagctcaggcggctctggcacacgtgagggacggtagccattct
ctacacagtgctctgttccgcggcgtggtggccggacctggggcttccagcctggagaaa
caagcggaggcgctgcgggtaaagaacacggtttactgtgctgtcattttctctgaattt
cttaaggagctggcagctttggcacaggagcatgcagtggctatgcccttcccacccagc
caaggcaccgaggagtga
DBGET
integrated database retrieval system
