Ictalurus punctatus (channel catfish): 108266524
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Entry
108266524 CDS
T04658
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04530
Tight junction
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108266524
09144 Cellular community - eukaryotes
04530 Tight junction
108266524
09142 Cell motility
04810 Regulation of actin cytoskeleton
108266524
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108266524
05100 Bacterial invasion of epithelial cells
108266524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266524
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108266524
04147 Exosome [BR:
ipu04147
]
108266524
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Arp2/3 complex
108266524
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108266524
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108266524
Exosomal proteins of other body fluids (saliva and urine)
108266524
Exosomal proteins of bladder cancer cells
108266524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
ALP_N
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
108266524
NCBI-ProteinID:
XP_017325444
Ensembl:
ENSIPUG00000012560
UniProt:
A0A2D0R4D7
LinkDB
All DBs
Position
6:complement(26809506..26823907)
Genome browser
AA seq
418 aa
AA seq
DB search
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGDQAQRRMMKGVDDLDF
FIGDEAIDKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVK
EFNKYDTDGSKWIKQYTGINAISKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGKLKP
KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctgggagattaccggcgtgtgttgtggactgcggtacaggatatactaaactggga
tatgcaggaaacacagaacctcaattcatcgtaccatcatgcatcgccatcaaagagtcg
gcgaaggtgggagaccaggcccagagaaggatgatgaaaggcgtggatgacctcgacttc
ttcatcggagatgaggctatcgacaagcccacctatgcgaccaagtggcccatcaggcac
ggtatcgtagaggactgggacctaatggagaggttcatggagcaggtcatctttaagtat
ctgagggcagagcctgaggaccactacttcctgctgactgaacctcctctgaacacacct
gagaaccgagaatacaccgcagagatcatgtttgagtccttcaatgtgcctggactttat
atcgccgtgcaggcagtcttggctctagcagcatcctggacctctcggcaggtgggagag
aggactttgaccggtacagtcattgacagtggagatggtgtcactcacgtcatccctgtg
gcagaaggctatgtcataggcagctgcataaagcacatccccattgcaggccgtgacatt
acctacttcacacagcaactgttgagagagagagaggtgggaattccacccgagcagtcc
ctcgagactgctaaagccgtcaaggagcgtttcagttacgtgtgtcctgacctggtgaag
gagtttaataagtacgacacagacggctcgaaatggataaagcagtacaccggcattaat
gccatcagcaagaaagagtttaccattgatgtgggatatgagcgcttccttggcccagag
atcttcttccaccctgagtttgccaatccggacttcactcagccaatctcagaagtggtt
gatgaggttatccagaactgtcccattgatgtgcgtcgtcccctctataagaacatcgtt
ctgtcaggaggctcgaccatgttccgtgatttcggccggcgcctgcagagggacctgaag
agaactgtggatgctcgtctcaaactgagcgaagaactcagcggtggcaaattgaagccc
aaacctattgatgtgcaggtcatcactcaccacatgcagcgctatgccgtgtggtttggt
ggatccatgctagcctcaacacctgaattctaccaggtgtgtcacaccaagaaggattat
gaggaaatcggccccagcatctgtcgccacaaccctgtctttggtgtcatgtcctaa
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