Ictalurus punctatus (channel catfish): 108266564
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Entry
108266564 CDS
T04658
Symbol
lamp1b
Name
(RefSeq) lysosome-associated membrane glycoprotein 1b
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu03273
Virion - Lassa virus and SFTS virus
ipu04140
Autophagy - animal
ipu04142
Lysosome
ipu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108266564 (lamp1b)
03272 Virion - Hepatitis viruses
108266564 (lamp1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108266564 (lamp1b)
04142 Lysosome
108266564 (lamp1b)
04140 Autophagy - animal
108266564 (lamp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266564 (lamp1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108266564 (lamp1b)
04090 CD molecules [BR:
ipu04090
]
108266564 (lamp1b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108266564 (lamp1b)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
108266564 (lamp1b)
Other autophagy associated proteins
RNautophagy/DNautophagy
108266564 (lamp1b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108266564 (lamp1b)
CD molecules [BR:
ipu04090
]
Proteins
108266564 (lamp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
SCY_4732_
Motif
Other DBs
NCBI-GeneID:
108266564
NCBI-ProteinID:
XP_053536656
Ensembl:
ENSIPUG00000014363
UniProt:
A0A9F7TKZ0
LinkDB
All DBs
Position
6:1276774..1280268
Genome browser
AA seq
245 aa
AA seq
DB search
MKPHTGNHALPSGLTLLLLEHYARVCPATCCPPLRLRPPPSPPSIPESGSYNVTNNGTTC
LLARMGLQLNITYTSRSQGKVVRDIINLQPKVTNTSGSCEAETAKLALTEGNTSLTFFFL
LNSTTNKYHLDGLALSINLPDLPRPMDVHNNSLGYLQGTLGYSYMCHQEQILPVGQNFSL
NTFHLQVQPFGVIGNEFGAAEECELDKDDLLIPIAVGAALAGLVLVVLLAYLIGRRRSHA
GYQTI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcacaccggaaatcacgctctgccttctggactaactctgctgctgctggaa
cactacgcccgagtttgtccagcgacgtgttgtccaccacttcggctccgaccccccccc
tcacctcccagtatccccgagagcgggtcgtacaacgtcaccaacaatggcaccacgtgc
ttgttggcccgcatgggactgcagctcaacattacttacacctctcgctcacagggcaag
gttgttcgagatatcataaacctgcaaccaaaggtgaccaatacatctggttcctgcgag
gctgaaactgcaaagctcgcactcacggaagggaacacatccctgacgttcttcttcctt
ttgaattccacaactaacaagtatcaccttgatggactggcactctccatcaacttgcca
gacttgcctcggcccatggacgtccataacaatagtctaggctaccttcagggaactctg
ggctactcgtacatgtgccatcaagagcagatcttgcccgttgggcagaatttctccctg
aacacgttccatctacaggtgcagcctttcggtgtcattggaaatgagtttggagcagcc
gaggaatgtgagctcgataaagatgacctgctgatccctatcgctgtaggtgctgccctt
gcaggccttgtgttagttgtgctcttggcctacctgattggcaggaggagaagccatgct
ggctaccagacgatctaa
DBGET
integrated database retrieval system
