Ictalurus punctatus (channel catfish): 108266596
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Entry
108266596 CDS
T04658
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108266596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108266596
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108266596
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_8
TPR_14
TPR_19
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_7
RMD1-3
TPR_12
TPR_20
TPR_Slam
ANAPC3
TPR_10
TPR_9
MAS20
CABIN1_N
Connexin50
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
108266596
NCBI-ProteinID:
XP_017325620
Ensembl:
ENSIPUG00000006679
UniProt:
A0A2D0R721
W5UMB4
LinkDB
All DBs
Position
1:complement(11471516..11492822)
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AA seq
641 aa
AA seq
DB search
MAMRELVEAECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVNEFLQAP
PRPPHSFDMGQLLEEMQQIDQQTYRQAPQRAPDVAALALSGDWTAEFLSGADSAASPAQA
GFDAADADWTREFINEVADPGRWAEEYLEQSEEKLWLGDLGEKEQEREWTKEYQPGEELK
QTANELLAKVDDPKLQNTEFLRFVRQIGEGSVTVEDRAGKQLADKAQAREAQNWASSFTQ
VSEESAESWVDEFAASGPDFQQAKAAVESDIDFWEKLQEEWEEMAKRDAEAHPWLSDFDQ
LLSTSYDKGYQFEEENPYLSHEDPLAEGVKRMEAGDIPGAVRLFESAVQREPDNQLAWQY
LGTCQAENEQEFAAISALRRCIELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNP
KYRHILEQMDREKEREGVLEREKERERFGSLLPEALFNEVQSLFLSAAAADPTRVDPQLQ
CGLGVLFNLSGEYDKAVDCFTAALSVTPQDYLLWNKLGATLANGNRSEEAVAAYRRALEL
QPGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQRQAAGDLEGGASRAPGSATTIMSDN
IWSTLRMALSMMGESSLYTAADRRDLDTLLAHFCQRDGETD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtagaggcagaatgtgggggggccaatcccctcatgaaattg
accggtcacatgacccaagaaggcggagcttggagacatagatcaacgcccactatcccc
cccacgccgattgaaatagccaccgaggaagagctggtgaatgagtttctacaggcgccc
ccacgccctcctcacagtttcgacatgggccagcttttggaagaaatgcagcaaattgac
cagcagacctacagacaggccccacaaagagctccagacgtagcggcattggcactatcg
ggtgactggacagcagagttcctgtctggcgctgactccgcagcctctccggcccaggca
ggttttgatgcagcagacgctgactggaccagagaattcattaacgaagtggcagaccct
ggtcgatgggctgaagagtatttggagcagtcagaggagaagctatggttgggagatttg
ggagagaaggagcaagagagagaatggacaaaagagtaccaaccaggggaggagctgaag
caaacggctaatgaacttcttgcaaaggtcgatgaccccaagctgcaaaacacagagttc
ctgcggtttgttaggcagattggcgagggcagtgtgactgtggaggacagagcaggaaag
cagctcgctgataaggcacaggccagagaggcacagaactgggcgtccagcttcacgcag
gtgtcagaagagtctgccgagtcttgggtagacgagtttgccgcgtcgggcccggatttt
caacaggctaaagctgccgtggagagtgatatcgatttctgggagaagctgcaggaggag
tgggaggagatggctaagagagacgctgaggctcatccgtggctgtctgactttgaccag
ctgctcagcacctcatatgacaagggctatcagtttgaggaagagaatccgtacctgtcc
cacgaggacccgttagcggagggagtgaagaggatggaagctggggacatccccggagcc
gtgcgcctgttcgagagtgcagtgcagagagaaccagacaaccagctggcttggcagtac
ctgggaacatgccaagcagagaacgagcaagagtttgcagccatcagtgccctccgcagg
tgtattgagctgaagaaagacaatctgacagctctcatggctctggcggtcagcttcacc
aatgaatcactgcaccggcaggcctgcgagacgcttcgcgactggctgagacacaaccca
aagtaccggcatattctcgagcagatggacagggagaaggagcgggaaggagttctagag
agagagaaggagagggagagatttggatcactgctgccagaggctctgtttaacgaggtg
cagtcgttgtttctgagcgcggcggctgctgatcctacgcgggtcgaccctcagctgcag
tgtggtctcggagttctcttcaacctgagcggagagtatgacaaagctgtggactgtttt
actgctgccttgtctgttactccacaggattatttgttgtggaataagttaggcgctact
ctagctaacggaaatcgctctgaggaggctgttgctgcctacagaagggcgcttgagctg
caacctgggttcgtacgcagccgttacaatctgggcattagctgtgttaatctgggagct
cacagggaagctgtggagcatttcctggaggcgctctctcttcaaaggcaggctgctggt
gacttggaaggaggtgcaagtcgggcaccaggttcagccaccaccataatgtcagacaac
atctggtccaccctgcgcatggcactaagcatgatgggagagagttcgttgtacactgct
gccgaccggcgagatctggacacgctgctggcgcacttctgccagagggacggagagaca
gactga
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