Ictalurus punctatus (channel catfish): 108266629
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Entry
108266629 CDS
T04658
Symbol
rbm44
Name
(RefSeq) RNA-binding protein 44 isoform X1
KO
K25080
RNA-binding protein 44
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108266629 (rbm44)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
RRM domain-containing proteins
108266629 (rbm44)
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Gene cluster
GFIT
Motif
Pfam:
wHTH_TTC3
TTC3_9th
RRM_1
NAD-bd_HRPKS_sdrA
Motif
Other DBs
NCBI-GeneID:
108266629
NCBI-ProteinID:
XP_017325690
Ensembl:
ENSIPUG00000021990
UniProt:
A0A2D0R792
LinkDB
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Position
6:22586660..22594141
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AA seq
1039 aa
AA seq
DB search
MWYPSCRLVPIYFEPNVCRSADVPAAVMWPVIPLDQHMCLAVNDMVGYQEHCFSVADGRK
FLLSKSVFDLVNVSHFLEFTDPKLLGWYVSLPEEDRQLIQEEGGLIQFLHRHPALEVSRH
VVCLKRHVIGTPLPEPDMSSKLERSRRATSYGVSECVNCRTSCPSGTKKCRRCSTLVLNT
EENVCVLEEEKSLRLLPNNVREELNLLKAKGDLGEDMSVSSYQQFDSLQGTANNLSTTWS
NPLNRFQQPGQPRKNSSDGQLLCQMWEESVRCDGNDIRVLKDPSAQASFLLDRELEMQGH
SQNSDDDQVPLLPDNNSAVPNLEEETLPEYYSFNSTTMGHTSAQWSDATNTSMMATKGST
EASTADELVACDVKNGTFPDSLSFHSNSSEWTDLSEDCQNLSNEDDLECETKTDEYHSVI
EEASSSAACVNPSWSASGQCTREREFTCEGCISSPSLNKLNVKTTTACEVSPVSLHVSQA
VDASNDFRACFTSTGATEITQDLLAMVHKDVSTDTDSCLVNEETQTTQRPTSEKYTVTEI
YMSDLDALCEEFGNLRKMEKELMHLKDDMARSGPGTAGGPKSERQKSHCGCGAVPRARLA
ELRLLALQFAMCQQHCWRCFYTSPQGETSLQGTEALLDAMSQTLKSLEDRYLKMKMMILE
GVPLDNLKPLSVDTKRLTAATCYRPSLIYEAFLGDGKPEFSFKPSHLEDEGQTNQVDEVL
NINLADRGHFNKNTTAHWHDSATSSKTAISKRCRGGMPGSSQQPGVSTDAKPGAPKELHS
SDAWFDAEEELGCDRQSCKEDQQTGQRDQGNSKKELKVRSDQCFLLCVSNLPNSVTEHDL
LLWFAKYHASQVSFSKFSNGFVCLPWMCFFRAAVLSVRNPKDAEAAVREMNGRSIQGHTL
HVEHILKSPTDSQATIKEPCVHLAPAALKAGSVGKRSITHSSNNNVHTSRPFRCSLDKLT
NICPTPTASGTCVPQHYGTMGSFDTIMAQLSERHPKMGRQQIVSALLELREKHHGVLSGL
PLREIVDMTSELLTHSTTD
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatccttcttgccggctggtaccaatttacttcgagccaaacgtgtgcagatcc
gcggatgtgcctgctgcagttatgtggcccgtcataccgttggaccagcacatgtgcctt
gctgttaatgacatggtcgggtatcaggagcattgcttttctgttgcagatggaaggaaa
ttcctgttgagcaagtctgtgtttgatcttgtgaatgtgagccactttctggagttcact
gatccaaagttgcttggttggtatgtctctttaccagaagaagacaggcagctaatacaa
gaagaaggaggactgattcagtttctgcatagacatcctgctcttgaagtatctagacat
gttgtttgtttaaagcggcatgttataggaactccccttccagaacctgatatgtcttca
aaactcgaaagatccagacgggctacttcttatggcgtgtcagagtgtgtaaattgtcgc
acgagttgtccatctggtactaaaaagtgcagacgctgtagcacgctggtcctaaacaca
gaggaaaatgtttgcgtattagaggaagaaaagtcacttcggttgctaccaaacaacgta
cgagaggagctgaatctcttaaaagccaaaggagatctcggtgaggacatgtcagtgagt
agttatcagcagtttgatagcctgcagggcaccgcaaataatttgtccaccacttggagc
aaccctttaaacagattccagcaaccagggcagccaaggaagaactctagtgatggccag
cttttgtgtcagatgtgggaggaaagtgtgcggtgtgatgggaatgatatccgagtgttg
aaggatccctcagcacaagcaagctttttgcttgaccgcgagcttgagatgcagggccac
agtcaaaatagtgatgatgaccaggtacctctgctgccagacaacaattcagctgttcct
aatttagaagaggagactctcccagagtattacagttttaacagcactacaatggggcac
acatctgcccagtggagtgatgccactaatacctccatgatggcaactaaaggcagcact
gaggcatctactgctgatgagcttgtggcctgtgatgtaaagaatggtaccttccctgat
tctttgtccttccacagcaactcgtcagagtggaccgatctctcagaggattgccaaaat
ctcagtaatgaggatgacctggaatgcgagacaaagacagatgagtatcatagtgtgata
gaagaagcctcaagctcagcggcctgtgttaatcccagctggtcagcatctggccagtgt
acgagagagagagaatttacatgtgaggggtgcatttcatctcccagcctaaataagcta
aatgtcaaaaccacaacagcgtgtgaggtctctcctgtttccctccatgtgagccaggca
gtggatgccagcaatgactttagagcatgttttacatccaccggggcaacggaaatcact
caggacctcttggcaatggttcacaaagatgtttccactgacacggattcatgtcttgtt
aacgaggagactcagacaactcaaaggcccacttctgagaaatacaccgttactgaaatc
tacatgtctgacttggatgctctttgtgaggaatttgggaacctcagaaagatggaaaaa
gagctaatgcatttaaaggatgacatggcaagatctggtcctggcactgctggagggccc
aagagtgaacgacagaagagtcactgtggatgtggtgctgttccacgtgctcgattggct
gagctgcgtctactggctctgcagtttgccatgtgccagcaacattgctggaggtgcttc
tacacatcaccacagggtgaaacttcacttcagggaaccgaagcgctgcttgatgcaatg
tcacagaccctgaagagcctggaggaccgttacctcaagatgaagatgatgatactagaa
ggggttcctctggataatctaaagcctctgtctgtagacaccaagagattaacagctgca
acgtgctacaggccgtctttgatttatgaggcttttttaggtgacggcaagcctgagttc
tctttcaagccaagtcatcttgaagatgagggccagactaaccaagttgatgaggtattg
aacataaacctcgcagacagaggacacttcaacaagaatacgacagctcattggcatgat
tctgccacatcgtctaaaactgccatcagtaagagatgtagaggaggcatgcctggttcc
agccagcaaccaggagtctctactgatgccaagcctggtgcacccaaagaactccacagc
agtgatgcctggtttgatgcagaggaagagcttggatgtgaccgtcagagttgtaaagaa
gaccaacaaacagggcagagggatcaagggaactcaaagaaggaactaaaagtgagatca
gatcagtgtttcttgctttgtgtctcaaacttgccaaacagtgttactgagcatgatctg
ctgctttggtttgcgaagtaccatgccagtcaagtgtccttttccaaatttagtaacggg
tttgtgtgtcttccatggatgtgcttctttagggctgcagtattgagtgtgagaaacccc
aaggatgcagaggctgcagtaagagagatgaatggccgatccattcaaggccacactctc
catgtggaacacatcctcaagtctcccacagatagtcaggccaccatcaaagagccctgc
gttcatcttgccccagctgctcttaaagcagggtctgtaggaaaaaggtcgatcacgcat
agctcaaataataacgttcatacctccagaccattccgctgcagtctggataagcttacc
aacatatgccctacacccactgcatctggtacttgtgtgccacagcactatggcaccatg
ggcagcttcgacacgattatggcccagttatcagagcgccaccccaaaatgggcagacag
cagatcgtcagtgctttgctggagctgagggaaaagcatcatggtgtcctcagtggcctg
cccctcagagaaatcgtggatatgacctctgaacttctcactcactccaccacagactaa
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