Ictalurus punctatus (channel catfish): 108266631
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Entry
108266631 CDS
T04658
Symbol
etv5a
Name
(RefSeq) ETS translocation variant 5a isoform X1
KO
K15593
ets translocation variant 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108266631 (etv5a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
108266631 (etv5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ETS_PEA3_N
Ets
Motif
Other DBs
NCBI-GeneID:
108266631
NCBI-ProteinID:
XP_017325694
Ensembl:
ENSIPUG00000022012
UniProt:
W5UJ54
LinkDB
All DBs
Position
6:22571389..22583270
Genome browser
AA seq
520 aa
AA seq
DB search
MDRFYDQQVPFMVPSNQKSSQVEEPYNRTIIERKRKFVDTELAQDTEELFQDLSQLQEIW
IAEAQVPDDEQFVPDFQPDSLTFHGPPPTKIKRELSPSKELSPCSEDRSPMLYGEKCLYN
YSAYERKTSVGFKPLTPPSTPVSPCSSTNTHPMHEQTPPPLVHNSTLRQRSLHGQPAVTT
SALSQRPLPLHSQTPPFAVPCPPQNHNAPFNNEHRFQRQMSEPCLPFPPSETQGKPNYIP
QASSTSPRDGRPPYHRQMSEPVVPVHPQGFKQELLDPRYTEQGVPNMGPPQAAFHPMAIK
QEPRDFGFDSEVPNCRSSFGRGASFYQSQESFSFDIDQHLYYDDTCVVPERLEGKVKQEP
SVFRDGLPYQRRGSLQLWQFLVTLLDDPANGHFIAWTGRGMEFKLIEPEEVARRWGIQKN
RPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYKFVCDPEALFSMAFPDNQRPNIKADPDG
LPVVDDETLPITHYDEGGTYLVDGGEQCVTGMPFPDGYVY
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacagattttacgaccagcaagtaccatttatggtcccatcaaatcagaaatcgtcc
caagtggaggaaccatacaacagaaccatcattgagaggaaaagaaagtttgtagacact
gaacttgctcaggacacagaggaactcttccaggacctcagtcagctgcaggaaatctgg
attgcagaagcccaggtgcccgatgatgaacagtttgtcccagactttcagccggacagc
ttgacgtttcatggccctcctccaaccaagattaaacgggagctgagtccttcgaaagag
ctttccccctgtagtgaggacaggagtcccatgctgtatggagagaagtgcctttataac
tacagtgcctatgaaaggaaaacctctgttgggttcaagccattgactcctccttcaacg
cctgtgtcaccatgcagttccaccaacacgcaccccatgcatgaacagacacctcctcct
cttgtccataattctacattaaggcaacgttccctacacggacagcctgctgttaccacc
tcggccctcagtcagaggcccctcccactacacagccagaccccaccttttgcagttcca
tgcccacctcaaaaccacaatgccccctttaacaacgagcacaggtttcaacgccagatg
tcggaaccctgtttgccattcccgccttccgagacccagggaaaaccaaactacattccc
caagcatcaagcacgtcacccagagatggccggccaccgtatcatcggcaaatgtccgag
ccggtggttcctgttcatcctcagggttttaaacaggagctgctggaccctcgctacact
gagcagggtgtccccaacatgggcccaccccaggctgccttccacccaatggccatcaag
caagagccacgagactttggcttcgactctgaagtgcctaactgccggtcttcatttggg
agaggagcaagcttctaccaaagccaagaaagtttttcatttgacatagatcagcacttg
tattatgacgatacatgcgtagttcctgagcgacttgaagggaaagtaaagcaggagcct
tctgtatttcgtgatggcctaccttaccaacgtcgtggatctctccagctctggcagttt
ctggtgacacttcttgatgaccctgccaacggtcacttcattgcttggacaggacgtggc
atggagtttaaactcattgagccagaagaggtggctcgacgttggggcattcagaagaac
cgaccagccatgaattatgacaagctgagtcgctctctgcgctactactatgagaagggc
atcatgcagaaggttgctggtgagaggtacgtctacaagtttgtgtgtgaccctgaggcc
ctcttctctatggcctttccagacaaccagaggccgaacattaaggctgatcctgatggc
ctgcctgtagtggacgatgaaacactacccatcactcactatgatgaaggaggcacttac
ctggtagatggaggagagcagtgtgtcactgggatgcctttccctgatggctatgtgtac
tga
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