Ictalurus punctatus (channel catfish): 108266684
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Entry
108266684 CDS
T04658
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108266684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108266684
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108266684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
WDR54
WD40_like
RMC1_N
Utp21
Motif
Other DBs
NCBI-GeneID:
108266684
NCBI-ProteinID:
XP_017325817
Ensembl:
ENSIPUG00000003396
UniProt:
A0A2D0R5D1
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All DBs
Position
6:complement(32974629..32991888)
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AA seq
941 aa
AA seq
DB search
MGLTKQYLRYVPSAVFGLIGSQKANVVFVRLRGGEQGRYVAVGACEHVFIWDVRKAEKVL
ILEGKKHEVTYLCPSPDGIHIAVGYEDGGVRIFSLLNGESNVSFNGHKSAITVMHYDALG
ARLVTGSRDTDVIVWDIINECGLYRLKGHKDAITQALLLKKKNLLVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWGMVLLNQENRLLTGSADSELRAWDIDYLEEDKEVGEPQEKKGKS
FLDDDDDDDDENEGPNEEAEDRILSCKKAGSILREARDRVVSLIADPKAKVLACHGLDNT
MEIFAVLPEEEIQKKMERKLKKAKRKAKSQDSSADGADIVVERKLTDEIQKLASLKASSK
IRSVDCLLSPNGEMKVALLLQNNTVEAYSVKTTEKNPTGTKTSRLTLGGHRTDARTLSFS
SDNIAILSASGDTVKVWNRATLQVIRTMACEYALCSLFVPGDRQIIVGTKSGKIQIFDLA
SGSLLETAEAHEGALWSICLSPDQRGIVTGGADKMVKFWDFELIKDNESGANKRLTVKHT
RTLQLDEDVLCVRFSPDQRLLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCLDISHDS
ALIATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDRKVKQWDAD
KFEHIQTLEGHHGEVWCLAISPSGDHIVSSSHDKSLRLWERTREPIILEEEKEMEREAEF
EESLAKGDEPVVPGETKGEAEPAGKKTIETVKAAERIMEALELYREESKNLEQHKAACEA
AGKELPPPAMNPVLVAYGRISPAQYVLDVIKKVRSSELEVSLLVLPFPYIPDLLSLLNTY
MQQGLEVELVCRCLFFLLRIHFGQITSNQMLLSVIDELRTNTISKVREIRDVLGFNNAGL
QFLQREIESKEDVMFFADATDRFQEKKRKRRKRERAILTIT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgactaagcagtacctgcgctacgtgcccagcgcagtgtttggtctgatcggc
agtcagaaggcgaatgtggtgtttgtgcggctgagaggaggagagcagggccgctatgtg
gctgtaggagcctgcgagcatgtcttcatatgggatgtgcgcaaggctgagaaggttcta
attctcgagggtaagaagcatgaggtgacgtatctctgcccttctcctgatggtatccac
atagccgtgggttatgaggatggcggcgtgcgcatcttcagccttttaaacggcgaaagc
aacgtctcttttaacggacacaaatccgccatcacagtcatgcattatgacgcactggga
gcgcgacttgttaccggctccagggacacagatgtgattgtctgggacataataaacgag
tgtggtttgtacaggctgaaaggacacaaagatgccatcacacaagctttgctcttaaag
aagaaaaatttgctcgtcacaagctcgaaggacagctttgtaaaatggtgggatctggac
acgcagcattgttttaagacaatggtgggccaccgcagtgaggtgtggggaatggttctg
ttgaatcaggagaacaggctgctgaccggctctgctgacagtgagctccgagcctgggac
atcgattacctggaggaggataaagaagtaggggagccacaggagaagaaaggaaagagt
ttccttgatgatgatgatgatgatgatgatgaaaacgaaggacctaatgaagaggcagaa
gatagaatcctcagctgtaagaaagccggctccattctgagagaagccagagatcgggtc
gtgtccttgatcgccgatcccaaagccaaagtcctggcgtgccatggccttgacaacact
atggagatctttgctgtgttgccagaggaagaaattcagaagaaaatggaaagaaagctg
aaaaaggccaagaggaaggccaagtctcaggatagcagtgctgatggagcagatatagtc
gtggagcgaaagctgacggatgagatccagaagctggccagtttaaaagcctcctctaag
atcaggtcggtggactgccttctgtctcctaacggcgagatgaaagtggctctgttgctg
cagaataacacagtggaggcttacagtgtaaagacaacagagaagaaccctacaggcacc
aagacgtctcgtctcaccctgggtggccaccgcacagacgccagaacgctgtctttcagc
tcagacaacattgccatcctgtctgcctctggagacactgttaaagtctggaacagggcc
actttgcaggtgatccgcaccatggcgtgcgagtatgcactctgctcactgttcgtaccc
ggggatagacagatcattgtaggaactaagagtggaaagattcagatttttgacttggca
tcaggcagcctgctggagactgcagaagctcacgagggagctctgtggtccatctgtctc
tctcccgatcagaggggaattgtaactggaggagctgacaagatggtgaaattctgggac
tttgagctcataaaggacaatgaatcaggagccaacaagagactgacggtgaaacacact
cgcacgctccagttggacgaggacgtgctgtgtgtgcgcttcagtcccgatcagagactt
ttggcagtctctctcctcgactgcactgtgaagatattctacacagacacgctgaagttt
ttcctgtctctgtatggacataaacttcccgtgctgtgtttggacatttcacacgatagt
gcactgatagccactggatcggcggacagaaacgtgaagatctggggtctggactttggt
gactgccatcgttcgatgtttgcacatgacgacagtgtaatgttccttcagtttgtcccc
aaaacccatctgtttttcacagcgggaaaggacagaaaggtcaaacagtgggatgctgac
aagtttgaacacatccagaccctggagggacaccatggggaagtatggtgcctggccatc
agtcccagtggagaccacattgtctcctcttctcatgataagtccctcaggctttgggag
agaacccgggagcctatcattctagaagaggagaaagagatggaaagagaagcagaattt
gaagaatctttagccaaaggagatgagccggtggtccccggcgagaccaaaggcgaggcc
gagcctgcaggaaagaagactatagagacggtcaaagccgcggagcgtataatggaggca
ctggagctctacagagaggagagcaagaatctggagcagcacaaggctgcttgtgaggca
gcagggaaggagttacctccaccggcgatgaacccagttctcgtggcttatggacgtatc
tcacctgctcaatatgttttggatgtcataaagaaggtccggtccagcgagttggaggtg
tctctactggtgctgccgtttccgtatatccctgatctgctctcgctcttaaacacctac
atgcagcagggcctggaggtggagctggtctgccgctgcctcttcttcctgctcagaatc
cactttgggcagatcaccagtaaccaaatgctgctgtccgtcattgacgagctgaggacg
aatacaatctctaaagtgcgggagatcagggatgtgctgggctttaacaacgcgggcctt
cagttcctgcagcgagagattgagagcaaagaagatgtgatgttctttgctgatgccact
gatcgctttcaggagaagaagagaaagaggagaaagagagaaagggccatactgaccatc
acatga
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