KEGG   Ictalurus punctatus (channel catfish): 108266747
Entry
108266747         CDS       T04658                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108266747
Membrane trafficking [BR:ipu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108266747
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    108266747
SSDB
Motif
Pfam: LLGL WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40 WD40_Prp19 Beta-prop_HPS5 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_VPS8 Lgl_C Beta-prop_DCAF4 Synaptobrevin Beta-prop_EML Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 108266747
NCBI-ProteinID: XP_017325916
Ensembl: ENSIPUG00000023779
UniProt: A0A2D0R785
LinkDB
Position
6:complement(18189581..18322101)
AA seq 1264 aa
MKKFRKVLDGLTTSSPASAGGSPSCGSAAGTPTAAATPRELDIQETLMAEHFHICKTVRH
GFPYQPTALAFDPVQKILAIGSRSGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNVESF
ILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVMWDLRSKRADFRI
YYDEAIHSVSWHHEGRQFMCSHSDGSLSMWNLRNTAKPFQVTFPHGKSQRDGRKESCKPI
LKVEYKTCRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDHPIVEFLVLCETPY
LNEVQEPYAVAVLLEKDFIVVDLTQSNFPIFENPYPMDVHESPVTCTAYFADCPPDVIPV
LYSIGAKHKKTGYSHKEWPVSGGTWTLGSQTYPEIIITGHADGSIKFWDATAITLQMLYK
LKTSKVFEKVKGCEGGRSAELVEEDPYAVQMVSWCPQSRIFCVVGISSHVILYRFSKHDA
NTTITALEVRLQCDVEDVISPSDTENTVCVTDVGAHSPQPPSPRSNTPDSVRDRIPCLKV
KDRIIWMPPGYQAELVIQLLWVDGEPPQQITSLDLNSAYGLLAVGNCNGLAVVDYLQKTV
IVCMSTLELYGSADPFQRLTRSPRKNRQSTSDICMRGLSNFYSDSKKRIRTSYQSLTELS
DNQVSLDLERSKSPTSVPYSSYVHNEPRGTAEPVSNLRASHYSPVFYLLDNVKGPGRKLS
LPTDLKSDLDHVNGHCTSPTSQPCVSGRPRAPGAPEGPRLTRRGPGRPPFRKAQSAACME
VSLPVSSLTEGYPSRRAMLQQLHGVSMYSHDEHHTTTYSWSERESRENSFSRSRSSSVSS
IDRDTKEAVTTLQFAESYGRKSDALPTPCLWVGTSLGLVLLMPLSIATDEQERLEEPVTV
APTSTVLMLKGSVLHFGFLDCTGALIHSAYEVWKDPHGAEDHDRPRRRKLVNFSSCSSQE
ASGDGHLAVVCSERQAKVFFMPSQACLYVHNITESSFVLRADVVAVSNSVCLACFCANGH
VMILSLPSLRPLLDVHYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEMCDNLQ
EMLGELFTPIETPEAQNRGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGQGSV
ETLRVAAGGAVGDLARARIALDERGQRLGELEERTAQMMAGAETFSKHAHELMLKCKDKK
WYQF
NT seq 3795 nt   +upstreamnt  +downstreamnt
atgaagaagttccggaaggtgttggacggtctgaccacgtcgtctccggccagtgctgga
ggctctccatcgtgcggcagcgccgctggaactcccactgcagcagcgactccgcgcgag
ctggacatccaggagaccctcatggccgagcacttccacatctgtaagactgtgcgtcat
ggcttcccctaccagcctacagctctagcgttcgaccctgtgcagaagattctggctatt
ggatctcgctctggaggagtgcgcattctgggacggccaggagtggactgctattgtcag
catgagagtggagcggctgtactgcaactgcagttccttataaacgagggagcgttggtc
acagcctgtgcggacgacactctgcacctctggaaccttcgtcagagacgtccagcaata
ctacactcgctcaaattcaacagagagcggatcacgttttgtcatcttccattccagagt
aaatggctttatgttggaacagagcgaggaaacacacacattgtcaacgttgagtcattt
attttgtccggatatgtcattatgtggaacaaggccatagaactatcgacaaagacacac
ccagggcctgtggtccacctgagtgacagtccaaaagacgaagggaagctgctgattggc
ttcgagagcggcactatagtgatgtgggacctgcgatcaaaaagagctgacttcagaatt
tactatgatgaggcgattcactctgttagttggcatcatgaaggacggcagttcatgtgc
agtcactctgacggaagtctcagcatgtggaacctgagaaacacagccaaacccttccaa
gtcaccttccctcacggtaaatctcagcgagacggcagaaaagaatcatgtaaaccaatt
ctcaaggtggagtacaagacctgcaggaacagtgagcccttcgtcatcttctctggaggt
ctatcatatgataaagcaggcaggaggcccactctaaccatcatgcatggcaaagccatc
acagtgctggaaatggaccatcctatagtggagttccttgtgctctgcgagactccctat
ctcaatgaggtgcaggagccatatgcagtggccgtgctactggaaaaagacttcatcgtg
gttgatcttacacagagcaatttccctatttttgagaatccctatcccatggatgtccat
gagtctccagtcacatgcacagcttattttgccgactgtccccctgacgtcatccccgta
ctgtactccataggagcaaaacacaaaaagactggctacagccacaaggagtggccggtc
agtggtggcacgtggacactcggttctcaaacatatccagagattattatcacaggacat
gcagacggatcgataaagttttgggacgccacagccatcacgctgcagatgctttacaag
ctgaagacgtcgaaggtgtttgagaaggtgaagggctgtgaggggggccgcagtgccgag
ctggtggaggaggacccctatgctgtgcagatggtcagctggtgtccccaaagccgcatc
ttctgtgtggtgggcatcagttcccatgtcatattgtaccgcttcagcaaacatgatgcc
aacaccactatcacggctctggaagtacgtctgcagtgtgacgtggaggatgtaatctca
ccatcagacaccgaaaatacggtgtgtgtaacagatgtgggcgctcactctcctcagcca
cccagcccgcgcagtaacaccccggatagtgtgagagaccgcatcccctgcctaaaggta
aaagatcgcataatctggatgccccctggttaccaggctgaacttgttatccagttgtta
tgggttgacggagagccacctcagcaaattaccagcctggatttaaactccgcctacggt
ctgttagctgtaggtaactgtaatggtctggcagtggtggattatctgcagaagacagtg
atagtgtgcatgagcactctggagctgtatggctcagctgaccccttccaacgcctcaca
cgttccccacgcaagaaccgccagtccacatcagacatttgcatgcgtggcctgtctaac
ttttattcagattcaaagaaacggatccgtacctcctaccagagccttaccgaactttcc
gataaccaggtatctttggacctggaacggagcaaatcacccacctcagtgccctactcc
tcctacgtacacaatgagcctcggggcacggcggagcccgtgtccaatctacgtgccagc
cattacagtccggtcttttacctgttggacaatgtaaagggaccaggcagaaagttaagt
ctacccactgatcttaagagtgatcttgatcatgtgaatggacattgcactagtccaact
tctcagccatgtgtatctgggagaccccgtgctccaggggcccctgaggggcctcgtctc
acccgtcgtgggcctggacgaccgccattccgcaaggcccagtcagccgcatgcatggag
gtctctttgcctgtgtcctccctcaccgaaggttacccgtccagacgggccatgctgcag
cagttgcatggtgtcagtatgtactcacatgatgagcaccacaccaccacctactcctgg
agtgagagagagagtcgggaaaattcattcagccgatcacggagttccagcgtatccagt
atagaccgggataccaaagaggctgtgaccacgctgcagtttgcggagtcgtatggacgc
aagtcagatgcactgcctacaccatgcctatgggtgggcaccagcctaggccttgttctg
ctaatgcccttatccattgccaccgatgagcaggagaggctagaggaaccagtcaccgtt
gcacccaccagcacagtcttaatgctgaaaggttcagtcctgcattttggttttctggac
tgcactggtgctttgatccacagtgcatatgaggtgtggaaagatccgcatggtgccgag
gaccatgatcggccccgcagaagaaagctggtcaacttttcctcctgttcctcgcaggaa
gccagtggcgacggccacctggctgttgtgtgctctgaacgccaagccaaggtcttcttc
atgccctcacaggcctgcctctatgtgcacaacatcacagagtcatcattcgtgctgcgt
gctgatgtggtggctgtctccaacagcgtgtgcctggcctgcttctgtgccaacggacat
gtcatgatcctcagcctgccaagtttacggcccctgttggatgtacactacctgccacta
acagatatgcgcattgccagaacattctgcttcaccaatggtggtcaggctctctatctg
agctctccaaccgaaatacagcgcatcacctacagccaggagatgtgtgataatttgcag
gagatgctaggggagcttttcacacccattgagacccctgaggcacagaaccgaggcttc
ctgaagggattttttgggggcaacgcacagacctttgaccgagaagaactctttggtgag
gcagcagcagggaaggcttctcgcagtctggcccagcatataccaggccagggcagtgtg
gagacattacgggtagcagctggcggggcagtgggtgatcttgcccgagctcgaattgcc
ctggatgagagaggacagagactaggagagctggaggagaggacggctcaaatgatggct
ggtgctgagacattctccaaacatgctcatgagctgatgctgaaatgcaaagacaagaag
tggtatcagttttaa

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