Ictalurus punctatus (channel catfish): 108266795
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Entry
108266795 CDS
T04658
Name
(RefSeq) tetratricopeptide repeat protein 21B isoform X1
KO
K19673
tetratricopeptide repeat protein 21B
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108266795
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
108266795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_C
ARM_TT21_2nd
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_8
TPR_1
TPR_7
TPR_6
TPR_12
TPR_11
ANAPC3
CFAP70_TPR_C
TPR_CcmH_CycH
CFAP70_mid_TPR
RMD1-3
TPR_Slam
TPR_15
TPR_21
TPR_9
Wzy_C_2
TPR_Psidin_N
PknG_TPR
Gly_acyl_tr_N
Motif
Other DBs
NCBI-GeneID:
108266795
NCBI-ProteinID:
XP_017326021
Ensembl:
ENSIPUG00000016012
UniProt:
A0A2D0R7J2
LinkDB
All DBs
Position
6:25108020..25129612
Genome browser
AA seq
1320 aa
AA seq
DB search
MAEVEDEEITQALIIYYCQEKYSNHVLKVSSEAQRKFSSSPIYMFFHAYGLLMQDHVQEA
IQELEQVKDKRDVSLCALMALVYAQKKRPNPDRDTIQELDVKVKENRKSASPKALYHAGM
FLWLLGRNDKAREYVDRMIKISNGSSEGLILKGWIDLTSGKDGYTKKSGKYFDEALKEKI
SIFALMGKVQYNEVRQNYSGAIETVNQVIVGYPSFIPALVKKMKLLLNMQDWEQTVDAAQ
RLLQKDRSNLEGLRMLALHSLCREGDLGETVEQLLTLISNLDSQEPNNPELLYRMSLAFT
RGCGRAEKVLQHTHALVERAFSMASGDAELATELGYQLVLQGRAKEAIKWYKTAMKLDES
SVSALMGIIHCQLSEGHLQDAEQQLEFLTEIQQSIGKSAELLYLQAVLAIRKRKSQDEVT
NLLNVTVDTHFSTLQGLPLSVEYYEKLNPDFLLEIAKEYLALCPAKPPAQGQAPAPQLQR
CAAVLDTVVKIVPGLLQAVFLMAKVRLLSGNIEAAQSSLQHCLEQKPSFADAHLLMAQIH
LLQGNFKLSSQSLELCLSHNFEVKEHPLYHLIKAQTQRKMGELQEAIQTLQLAMSMPGVK
RVGSSAKTKARRVELSTADFVSVYLELAEALWLNGEQHEAAKVMQDAINEFTGTPEELRV
TIANADLALLRGDTELALSMLRNITQEQPYFVQATEKMADVYLNHRKEKRLYVSCYRDLV
EKIPSSHTYLLLGDAYMNIQEPEMAIEVYEQALKRNPKDGAVASKIGKALVKTHNYVKAI
NYYEAALKTGQQSFLRYDLAELLMKLRQYERCEKVLHEALSHDPVNELPLLTEDCRYLVL
LAKIQSKVNKNDEALLSLHRARDVQAKVLKRVQLEQLDAVPMQKQLASEICAEIAKHCSH
QRGYERAVKFYKEALVYCESDSKVMLELAQLYLTLDDVEACQQQCGIILKNDPVNEAATL
MMADLMFRKQDYEQAVFHFQQLLERKPDNYPTLSRLIDLLRRAGKLEEIPRFLDMAEKHS
PRPKFEPGYNYCRGLYLWYTGEPNEGLRHFNKARKDNDWGQNAVYNMIEICLNPDNETMG
GEVFENLDGDMGNSTEKQESEQLAVRTAEKLLKELKPQTSQGHIQLRILEHYCYLATKQK
ANVEKALGVFIEIANNEKDHVPALLAMATAYMILKQTPRARNQLKRIAKMNWNIVDADEF
EKSWLLLADIYIQSGKYDMAGELLKRCLRHNKSCCKAYEYMGYIMEKEQSFRDAAMNYEL
AWKYGNQTNPTIGYKLAFNYLKAKRHVDAIDVCHKVLDAHPNYPRIRKDILDKARAALRS
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttgaggacgaagaaataacacaggccctgatcatttattactgccaggag
aagtattccaatcatgtgctgaaagtttcaagtgaagcccagcgaaagttcagcagtagc
ccaatctacatgttcttccacgcttatggccttctcatgcaagatcatgtgcaagaggcc
attcaggagctggaacaggtgaaggataagagagatgtatcattgtgtgcactgatggct
ctggtgtatgcccagaaaaaaagacctaaccccgacagagacaccatccaagagcttgat
gtgaaggttaaggagaatcgtaagagtgccagcccgaaagctctgtaccatgctgggatg
tttctctggctcctgggtcggaatgacaaggccagagagtatgtggacaggatgatcaaa
atctccaatggctcatcagaggggttgatactgaaaggttggatagacctgacttctggt
aaagatggctacaccaagaagtctggaaaatactttgacgaagctctgaaagagaaaatc
agtatttttgctctgatggggaaggtgcagtataatgaggtccgtcagaattactctggt
gccatagagacggttaaccaggtcattgttggttacccgtcattcatacctgctctggtg
aagaagatgaagcttctgttgaacatgcaggactgggaacagactgtggatgctgctcag
agacttcttcagaaagacagaagcaacctggagggactgagaatgctagcactgcattcg
ctctgccgagaaggcgaccttggggagacagtggagcagttgttgacccttatcagcaac
ctggactcacaagagcctaacaacccagaacttctttacagaatgtctttagctttcact
cgagggtgtggaagagcagaaaaggttctgcagcacacacatgcactggtggagcgggca
ttctctatggcgtcaggcgatgcagagctggctaccgaactgggctaccagctggtcctt
cagggcagagccaaggaggccataaagtggtataaaactgccatgaagttggatgagagc
agtgtctctgctctgatgggtattattcactgccagttgagtgagggtcacctgcaggat
gctgagcagcaactcgagtttcttaccgaaatccagcaatctatcggcaaatcagcggag
ctgctgtatttgcaggcagtcctggccattcggaaacggaagtctcaggatgaggtgacc
aacctgctgaatgtcactgtggacacacacttctccactctccagggcctgccactcagt
gtagaatactatgagaaactcaaccctgacttcctgcttgagatcgcaaaggaatacctg
gcactctgtcctgccaagcctccagcccagggccaggctcctgctcctcagttacagcgt
tgtgcagctgtgctggacacagtggtcaagattgtccctggacttctccaggctgtgttc
ctgatggcaaaagtcaggcttctgtcagggaacatagaggcagctcagagcagtctgcag
cattgtttggaacagaaaccctcctttgcagatgcccacctcctcatggcacaaatccat
ctcctccagggcaacttcaaactctcttctcagtctctagagctctgcctcagccacaac
tttgaggtaaaggagcaccctctgtatcatctgattaaagctcaaacccagagaaagatg
ggtgagctgcaggaggccattcagacgcttcagttggccatgagtatgccaggagtgaaa
agagtaggctcctctgccaaaaccaaagccaggagagtggagctcagcacagcagatttt
gtttctgtgtatctggagctggcagaagcactctggctcaatggagaacagcatgaggca
gcgaaagtgatgcaggatgctataaatgagtttactggtactcctgaggagctgcgcgtc
accatcgcgaacgcagaccttgccctgctgcggggggacacggagcttgcactgagcatg
cttagaaacatcacacaggagcagccctactttgtgcaagccacagagaaaatggccgac
gtctacctgaaccacaggaaggagaaacggctgtatgtaagctgctatagggatttggtg
gaaaagattcccagctcacatacatacttactattaggagatgcctatatgaacatccaa
gagcctgagatggccattgaggtttatgagcaggctttgaagagaaaccctaaagatggt
gctgtggctagcaagattgggaaagctctcgtaaagacccataactatgttaaggccata
aactattatgaggctgctcttaagactggtcagcagagcttcttgcgctatgatctggct
gaacttctcatgaagctaagacagtatgaacgctgtgagaaagttctgcatgaggctctc
tcgcacgaccctgtgaacgagctgcctttgctaacagaggactgccgttaccttgtactg
ctggccaagattcagagcaaagtcaataaaaatgatgaggctttgctttctttacatcgt
gcgagagatgtgcaggcgaaggtactgaagcgtgttcagttggagcagcttgatgcagtg
cccatgcagaagcagctcgcctctgagatctgtgctgaaattgccaagcactgcagccac
cagcgtggctatgagagagccgtcaagttctacaaagaagcgcttgtgtactgtgagagt
gacagcaaggtgatgttggaacttgctcagctgtatctaactctggatgatgtagaggct
tgccagcagcagtgcggcatcatcctgaagaacgacccagtcaatgaggcagcaacactg
atgatggctgatctgatgttcaggaaacaggactacgagcaggcagttttccattttcag
cagctgctggagaggaaaccagacaactatccaacactgtcccggctgattgacctgctg
cgcagagctggcaaactggaagagattcccaggtttctggatatggctgaaaaacactca
ccaaggcccaagtttgagccagggtacaactactgcagaggcctttacttgtggtacact
ggtgaacccaatgagggtttgcgtcacttcaataaggctcgtaaggacaatgactggggt
cagaatgcagtgtacaacatgattgagatttgcttaaacccggataatgagacgatggga
ggtgaggtgtttgagaacctggatggagacatggggaactccacagagaagcaggagtcg
gagcagctggcggtgcgaacagcggagaaactgttaaaagagctgaagcctcagacctct
caaggccacatacagctacgtatccttgagcattactgttacctggctaccaagcagaag
gccaacgtggagaaagctcttggagtgttcattgagatcgcaaacaatgagaaagaccat
gtccctgcactgttggcgatggccacagcctacatgatcctcaaacagactcctcgagcc
aggaaccagctaaaacgcattgccaagatgaactggaacattgtcgatgctgatgagttt
gagaagagctggttgcttctggcagacatctacatccagtccggcaaatatgacatggca
ggagagctgttaaaacgctgcctgcgccacaataagtcatgctgcaaagcttatgaatac
atgggttacattatggagaaggagcaatctttcagggatgcagccatgaactatgaactg
gcctggaaatatggaaatcagaccaatccaactatcgggtacaaacttgctttcaactat
ttgaaagcaaagagacatgtcgatgccatagatgtttgtcacaaagtcttggatgcacat
ccaaactatccgaggataagaaaggacattctagacaaagcaagagctgctttgcgatcc
tga
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integrated database retrieval system
