Ictalurus punctatus (channel catfish): 108266805
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Entry
108266805 CDS
T04658
Symbol
adarb1b
Name
(RefSeq) double-stranded RNA-specific editase 1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108266805 (adarb1b)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108266805 (adarb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
SNAD4
Motif
Other DBs
NCBI-GeneID:
108266805
NCBI-ProteinID:
XP_017326043
Ensembl:
ENSIPUG00000008384
UniProt:
A0A2D0R891
LinkDB
All DBs
Position
6:28891138..29072286
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AA seq
699 aa
AA seq
DB search
MDVDEEENMSSCSTDVKENRNLDNVFSKEGASVPEQLPNGSGGGGRKRPLEEGNNGHAHP
KFRPKKRKKTPGPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGS
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
APPEDSFYLGSNTNGSINPLGEYPVPPVTGNNSLAQAPLPPPTTFSTSSSGKNPVMILNE
LRPGLKYEFVSESGESHAKNFVMSVTVDSQTFEGSGRNKKLAKARAAQAALSALFNMQLD
QTPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTD
VKEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLLRYLYMQLEYFLSNGKEEH
EKSIFTRCEKHGYRLKDNVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLR
TKIESGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIY
FSSIILGSLYHADHLSRAMYQRIADIEHLPQQFTLNRPLLSGISNAEARQPGKAPNFSVN
WAVGDQGLEVINATTGKDDMGRPSRLCKHALYSRWVRLHSKLLSTLRIKMAKPSSYHEAK
QAAVEYHAAKQTLIKAFQKAGLGAWVKKPIEQDQFSLSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgaggaggagaacatgagttcctgcagcaccgacgtcaaggaaaatcgc
aacctggacaacgtcttctccaaggagggggcgagcgtgcccgagcagctccccaacggc
agcggagggggcgggcgcaaacgccccctggaggagggcaataacggtcatgcgcacccc
aagttcaggcccaagaaacgcaagaaaacgccagggccggttcttcccaagaacgctctc
atgcagctgaatgagatcaagccaggcctgcagtacaagctgctctctcagaccgggcca
gtccatgctccagtctttgtcatgactgtagaggtgaacgggcagctttttgaaggctcg
ggccccactaagaaaaaggcaaagctgaacgcagccgagaaggcactacgctcgttcgta
cagtttcccaacgcttcagaggcacatctggccatgggccgaacgctcaccgtcaacacg
gacttcacatcagaccaggccgacttccctgacatgctcttcaacggctttgagactcct
gcaccacccgaggactccttttacctgggctctaacaccaacggttccataaaccctctg
ggagaatacccagttcccccagtgactggtaacaacagcctggctcaggccccactgcct
cctcccacgaccttcagcacatcgtccagcggaaagaaccccgtcatgatcctgaacgaa
ctgcggccgggcctcaagtatgagtttgtgtcggagagtggtgagagccacgctaaaaac
tttgtcatgtccgtgaccgtggactcgcagacgttcgagggatcagggaggaataagaaa
ctggccaaggcgcgggctgctcaggccgcactctcggctctcttcaacatgcagctggac
cagacaccatcccgccagccaatccccagagagggccttcagctccacctgccccaggtt
ttagcagatgctgtctcacgtctcgtggtggacaagttcagcgagctcaccgacaacttc
acgtcccctcatgcacggaggaaagtgctagctggggttgtcatgacaacaggcaccgat
gtgaaggaggcccaggtgatctgcgtctccactggaaccaagtgcatcaacggcgagtac
atgagcgaccgtggcctggcacttaacgactgccacgctgaaatcatcgcccgccgctcc
cttctccgctacctatacatgcagctggagtacttcctcagtaacggcaaagaggagcac
gagaagtccattttcacccgctgtgagaaacacggctaccggctcaaggacaacgttcag
tttcacctgtacatcagcacgtcgccatgtggagacgctcgcatcttctccccacacgag
gcgggcgtcgaagatcagggagacagacacccgaacagaaaagctcggggtcagctgaga
actaagatcgagtcgggcgaggggaccatcccagtgcgctccagcaacaccatccagacg
tgggacggagttctgcagggggagagactcctcaccatgtcgtgtagtgacaagatcgcc
aggtggaacgtggtggggatccagggctcgctgatgagctacttcactgagcccatctac
ttctcgagcatcatcctgggcagcctgtaccacgctgatcatctctcccgggccatgtac
cagcgcattgcagacatcgaacacctaccccagcagttcactctcaaccggcccctgctc
agcggaatcagtaacgcagaagcacggcagccaggaaaagctcctaacttcagtgtgaac
tgggcggtgggtgaccaggggttagaggtcattaacgccaccacgggtaaggacgacatg
ggccggccttctcgcctctgcaagcatgctctctacagccgctgggttcgactgcactcg
aagctcttgtccaccttgcggatcaaaatggccaaaccgagctcgtaccacgaagccaag
caggcagcagtggagtatcacgccgctaagcagacgctcatcaaggccttccagaaagca
ggattgggggcctgggtgaaaaagcctatagaacaggaccagttttctctgagctcctga
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