Ictalurus punctatus (channel catfish): 108266807
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Entry
108266807 CDS
T04658
Name
(RefSeq) carbamoyl-phosphate synthase [ammonia], mitochondrial isoform X1
KO
K01948
carbamoyl-phosphate synthase (ammonia) [EC:
6.3.4.16
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00220
Arginine biosynthesis
ipu00250
Alanine, aspartate and glutamate metabolism
ipu00910
Nitrogen metabolism
ipu01100
Metabolic pathways
ipu01200
Carbon metabolism
ipu01230
Biosynthesis of amino acids
Module
ipu_M00029
Urea cycle
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
108266807
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108266807
00220 Arginine biosynthesis
108266807
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108266807
Enzymes [BR:
ipu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.16 carbamoyl-phosphate synthase (ammonia)
108266807
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C26: gamma-glutamyl hydrolase family
108266807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
GATase
CPSase_sm_chain
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
Motif
Other DBs
NCBI-GeneID:
108266807
NCBI-ProteinID:
XP_017326054
Ensembl:
ENSIPUG00000007625
UniProt:
A0A2D0R655
LinkDB
All DBs
Position
6:complement(6373068..6426720)
Genome browser
AA seq
1484 aa
AA seq
DB search
MLTVAKCMRNFFASVGRRPAARSLSVQAQTAHLVLEDGTVMKGYSFGHGRSTSGELVFNT
GLVGYPEALTDPSYRGQILTLTYPIVGNYGVPDMQDLDEMGLRKNAESDRVQVSGLLVQD
YSHDYSHWTSVKSLAQWLQDEKVPALYGVDTRMLTKIIRDKGTVLGKIEFEGQPVEMTDP
NVRNLVAEVSTKEVQVYGKGNPIKIVAVDCGIKHNIIRLLVKRGAEVHLVPWDQDLMSLE
YDGLFISNGPGDPATAGTLIQNVRKVLESDRPEPVFGICMGNQITALAAGAQSYKLPMGN
RGQNQPVLNVTTGQAFITAQNHGYGIDSESLPLGWSPLFINANDGTNEGIMHNTKPIFTA
QFHPEAKGGPTDTEFLFDVFLSLIKNGRNNSIVTVMPKKPAVTPRAQVSKVLVLGSGGLS
IGQAGEFDYSGSQAVKAMKEENLKTVLMNPNIASVQTNEVGTKQADTVYFLPITPKFVAE
VIKTERPDGILLSMGGQTALNCGVELFQSGVLQQYGVKVLGTPVESIIATEDRQLFADKL
KEIDERIAPSVAVASVPDALKAADEIGYPVMVRSAYALGGLGSGLCSDKHKLEETARKAL
AMSRQILVEKSLLGWKEVEYEVVRDAADNCVTVCNMENFDPLGIHTGDSIVVAPSQTLSN
EEYHMLRETAIKVVRHLGIVGECNIQYALHPTSLQYRIIEVNARLSRSSALASKATGYPL
AFVAAKLALGITLPEIKNAVSGKTTACFEPSLDYIVTKVPRWDLDRFQGMSQEIGSAMKS
VGEVMAVGRTFEESIQKALRMCHPSVDGFVPHLPLKRPWSGQHDLHQELAVPSSTRIFSL
AKALHDGVSVDRIHELTAIDKWFLHKLRRITELEQHLRQYTSSTIPADLLLKAKQEGFSD
RQLGQALRASEAETRSLRLSHNIQPWVKQIDTLAAEYPAVTNYLYCTYHGQEHDLDFTDQ
SVMVLGCGPYHIGSSVEFDWCAVSSIRALRQMGKRTVVVNHNPETVSTDFDECDRLYFEE
LTLERILDINHQEGCTGCIVSVGGQIPNNLAMPLHLNGVKILGTNPLQIHRAEERSVFSS
ILDELGVAQAPWRALSSLEDAFAFANKVGYPCLLRPSYVLSGSAMNVAYGEGEMKRFLEE
ATQVSQEHPVVITKFIRGAREVEVDAVARSGKVLAHAITEHVEDAGVHSGDATLMLPTQT
ISQGALEKVKAATRKIAKAFEISGPFNTQFLVKGNDVMVIECNLRASRSFPFVSKTIGVD
FIKVATQVMVGEPLNEHALPTLENPIIPVDYVGIKAPMFSWPRLRDADPVLRCEMASTGE
VACFGPDIYSAFLKAMLSTGFKLPQRGILIGIQHSFRPDFLTTAHKLKEEGFKLYATEAT
STWLNANDVATLPVSWPNQDGKDRNLPTISSLISDGHIDLVVNLPNNNTKFVKDNFLIRR
MAVDHGVPLITNFQVVKLFAEAIKYSSELDTTSLFHYRQREVGQ
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagtcgctaaatgtatgaggaatttctttgcttcagtgggacggagacccgcg
gcacgttccctcagcgtccaggctcagaccgctcacctggttcttgaagatggcacagtg
atgaagggctactccttcggccatggccggtccacgtccggagagttggtcttcaacaca
gggctcgtgggatatccagaggccctcacagaccccagctacagaggtcagattcttaca
cttacctaccccattgtgggcaactacggcgtccctgatatgcaggaccttgacgaaatg
ggactgagaaagaacgcagagtcggatcgcgtccaggtatcagggctactggtgcaggac
tacagtcacgactacagccactggacctcggtgaagtctctggcacagtggctgcaggac
gagaaggttccagctttatacggcgtggacaccaggatgctgaccaaaatcatccgagac
aagggaacagttttggggaagattgagtttgaagggcagccagtagaaatgactgaccca
aacgtacgaaatctggtggcagaagtgtcgaccaaggaagtccaagtgtatgggaaaggc
aatcctatcaaaatcgtggccgtcgactgcgggatcaagcacaacatcatcaggctgctc
gtcaagcgcggtgccgaggtgcatttggtgccgtgggatcaggacctcatgagcctcgag
tacgacggccttttcatctccaacggccccggagaccccgctacggctggaactctgatc
cagaacgtccgcaaggtgctggagagcgatcgtcccgagccagtgttcggtatctgtatg
gggaaccagatcacggctttggctgctggtgctcagtcctacaaactgcccatggggaac
aggggacagaaccagccggtgctgaacgtgacgacgggacaagccttcatcacggctcag
aatcacggctacggaatagacagcgagtctctgcctctaggctggagtccgctcttcatc
aacgccaacgacggaaccaacgagggcatcatgcataacaccaagcctatcttcacggcg
cagttccatccagaagcgaaaggtggccccactgatacagagttcctgttcgatgtgttc
ctatcgctgataaagaacgggcgaaacaacagcattgtgaccgtgatgccgaagaaaccc
gcagttacgccgagagcccaggtgtctaaagtgttggtgctgggctccggtggtctgtcc
atcggccaggccggtgagtttgactactcaggctcgcaggctgtgaaagccatgaaggaa
gagaacctgaagacggtgctgatgaacccgaacattgcctcagtgcagaccaacgaggta
gggaccaagcaggcggacacggtctacttcctgcccatcacgccaaagttcgtggcagag
gtgatcaaaaccgagaggccggacggcatcctgctctccatgggcggacaaacggcgctt
aactgcggagtggagctgtttcagagcggcgtgctgcagcagtacggcgtgaaagttttg
ggcacgcctgtcgagtccatcatcgccacagaggacagacagctgtttgccgacaagctg
aaggagatcgacgagcggatcgcccccagcgtggccgtggcatcggtgccagacgctctg
aaggcggcagacgaaatcggatatccggtgatggtgcgttcggcgtatgccctcggcggc
ctgggctccggactctgcagcgacaaacacaaactggaagagactgcacgcaaggcttta
gccatgagcagacagatcctggtggagaagtctctgctgggctggaaggaggtggagtac
gaggtggtccgagacgccgccgataactgcgtcaccgtctgcaacatggagaacttcgac
cccttaggcatccacacaggtgactccatcgtggtggcacccagccagacgctgtccaac
gaggagtaccacatgctgcgggagacggccattaaagtggtgcgccacctcggcatcgta
ggagaatgcaacatccagtacgccctgcacccgacatctctgcagtaccgcatcatcgag
gtcaacgcccggctgtccagaagctcagcgctggcatcgaaagctacggggtacccgctg
gcgttcgtagcagcgaagctggctctgggcattactctgcccgagattaagaacgcggtg
tctggaaagaccacggcctgcttcgagcccagtctcgactacattgtgacgaaggttcct
cgctgggatctggaccgcttccagggcatgtcacaggagatcggcagtgccatgaagagc
gtaggagaggtaatggcagtgggtcgtaccttcgaagagagcatccagaaggcgttgcgg
atgtgccacccctctgtggacggctttgtgccccacctgcctctgaagcgaccctggagc
gggcagcatgacctgcaccaggagctcgctgttccctccagcactcgcattttctccctg
gccaaggcgctgcatgacggagtcagcgtggatcggattcacgagctcacagcaatcgat
aaatggtttcttcacaaactgaggcgcattacagagctggagcagcacctgcgtcagtac
accagctccaccattccagccgatctgttgctgaaggccaagcaggagggtttctcggac
cgacagctgggccaggctctcagggcgtccgaggcagagacacgctccctgagactgagc
cacaacatccagccctgggtcaaacagatcgacacgctagctgcggaatatcctgctgtc
acgaactatctgtactgtacctaccatggccaggaacatgacctggacttcacagatcag
agtgtgatggttttaggctgtggtccttatcacatcggcagcagcgtggagttcgactgg
tgtgccgtgtccagtatccgtgccctcagacagatgggcaagcgcacagtggtggtgaac
cacaaccccgagacagtcagcaccgacttcgacgagtgcgaccgcctctatttcgaggag
ctgacgctcgagcgcattctggatattaaccatcaggagggatgtacgggctgcatagtc
tcagtgggagggcagatccccaataacctggccatgcctctgcacctgaacggcgtgaag
attctgggcacgaacccactgcagatccaccgggctgaggagagatcagtattctccagc
atcctggacgagctgggagtggctcaggcgccgtggagagccctgagctcactggaagat
gccttcgcgttcgctaataaagtgggttacccttgcctcctcaggccctcttatgtttta
agtggttccgcgatgaacgtggcctacggcgagggggagatgaagcgcttcttggaggag
gcgacccaggtgtcccaggagcatcctgtggtcattacgaagttcattcgtggagccaga
gaggtggaagtggacgcagtggccagatcaggcaaggttctggctcacgccattacggag
cacgtggaggacgccggagttcactcaggagacgccactttaatgctgcctacccagacc
atcagtcaaggagctctggagaaggtgaaggccgccacacggaaaattgcaaaggcgttt
gagatttcagggccgtttaacactcagttcctggtgaaaggcaacgatgtcatggtgatc
gaatgtaacctgcgtgcctcacgctccttcccgtttgtatctaaaaccatcggtgtggac
ttcattaaagtggcgacccaggtgatggtgggagaaccgctaaacgagcatgctctcccg
acgctggagaatcccatcattcctgtagactacgtcggcattaaggcgccgatgttttcc
tggccgcgtctgagagatgccgaccctgtcctgcgctgcgagatggcgtccaccggagag
gtcgcgtgcttcggaccggatatctactcggcctttctgaaggcgatgctctccacaggg
ttcaagctgcctcagagaggaatcctcatcggtatccagcattcatttaggccagacttc
ctcaccacggctcacaagcttaaggaggagggatttaaactttacgccacggaagctacc
tccacttggcttaacgccaacgatgtggccacgttgccagtctcatggcccaatcaggac
ggtaaagatcgcaacttaccgactatcagcagcctgatcagcgatggtcatatcgacctg
gtggtaaaccttcccaataacaacaccaagttcgtcaaggacaacttcctcatccgcaga
atggctgtggaccacggcgtgcccctcatcactaacttccaggtggtgaagctattcgcc
gaggccattaagtattcaagcgaattggacacgaccagtctcttccactatcgccagcgg
gaggtgggacagtag
DBGET
integrated database retrieval system
