KEGG   Ictalurus punctatus (channel catfish): 108266812
Entry
108266812         CDS       T04658                                 
Symbol
fn1a
Name
(RefSeq) fibronectin 1a
  KO
K05717  fibronectin 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04510  Focal adhesion
ipu04512  ECM-receptor interaction
ipu04518  Integrin signaling
ipu04810  Regulation of actin cytoskeleton
ipu04820  Cytoskeleton in muscle cells
ipu05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108266812 (fn1a)
   04518 Integrin signaling
    108266812 (fn1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108266812 (fn1a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108266812 (fn1a)
   04810 Regulation of actin cytoskeleton
    108266812 (fn1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    108266812 (fn1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108266812 (fn1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108266812 (fn1a)
   00536 Glycosaminoglycan binding proteins [BR:ipu00536]
    108266812 (fn1a)
   04990 Domain-containing proteins not elsewhere classified [BR:ipu04990]
    108266812 (fn1a)
Membrane trafficking [BR:ipu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    108266812 (fn1a)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   108266812 (fn1a)
Glycosaminoglycan binding proteins [BR:ipu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108266812 (fn1a)
Domain-containing proteins not elsewhere classified [BR:ipu04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   108266812 (fn1a)
SSDB
Motif
Pfam: fn3 fn1 Pur_ac_phosph_N Fn3_PBP1 Fn3_VIN3 FN3_DSCAM-DSCAML_C fn2 NDNF Fn3_Dep-1_2nd Fn3_Dep-1_3rd FN3_Tor_3rd TDBD
Other DBs
NCBI-GeneID: 108266812
NCBI-ProteinID: XP_017326060
Ensembl: ENSIPUG00000010834
UniProt: A0A2D0R8A5
LinkDB
Position
6:complement(27939158..27963614)
AA seq 2483 aa
MSGGCLATVLVVLLFSGAVLCMPKSARKSRRQAHERSRSSVSQDGCVEYGQFYGVGEQWE
RTYLGTVLLCTCHGVAGIKCKTKPEAEETCYDKVNARSYRVGETYERPKDGMIWDCTCIG
SGRGKISCTIANRCHEGGHSYKIGDTWMRPHDTGDYMLECVCLGNGKGEWTCKPIAERCY
DNAAGTSYTVGETWEKPYQGWMIVDCTCLGEGSGRITCTSRNRCNDQDLRMSYRIGDTWT
KTDAHGNILQCLCTGNGRGEWKCERHASLHTTGLGTGSRVITNLQPAVFQPVPLPVAPTE
GTCVTDSGISYTLGMRWIKTQGSKQMLCTCLGNGVSCKEWEGHSQVYGGNSNGQPCVFPF
VSMGKTFYSCTSEGRDDGQLWCSTTSDFEKDHQYSFCTEKNVLVTTRGGNSNGALCHFPF
LYNGHNYTDCTADGRRDGMKWCGTTYNFDGEKQYGFCPMAAHEEVCTTSEGVMYRVGDQW
DKRHDVLGHMMRCTCVGNGRGEWSCIAYSQLKDQCIVDGLTYEVNQTFTKRHDEGYMMNC
TCFGQGRGRWKCDAIDQCQEPDTKVFYQIGESWDKVIHGLRYKCFCNGNGLGEVSCEPQH
SFHGGTRPVQVIITEAGNQPNSHPIQWNAAPSAHIVQYVLKWREKNTRIPWREVTLPGHL
TSYTIAGLKPGITYEGQLISILRLGRREVTRFDFTTNYGSLATTEGDTNPPPPVVDTSES
VTEITSSSFVISWVSASDTVSGFRVEYELTEEGGQQGEPMVLDLPRTATSVNLSELLPGR
KYTVNVYEITDEGNSSLILTTSQTTAPDAPTDHEVGDVDETSITVRWSKPLAPITGYRVV
YTPSVEGSSGSTELTLPNTETSVTLSDLQPGQLYNISIYAVEENLESEPVFVQVNTAGEP
VLEEIPSPTDLQFFEVSDSKITITWTASPDVSGYRVSVGQVGADGLIEQQTVLPIMHNTY
AEVTPLEPGTIYRFFIFAIKAGEESEPLVGEHATKPDAPTNFHLANVTEDSALIIWSAPR
AQITRYRLFLTVEGSNPKQLHLPSRLTQYTLLNLQPDTQYTATLHSEKGNVLSEGATLTF
STSLPMRNAPRFTTDVTDTSIVISWNPVPRIGYKLTVKPSQGGEAPREVTSESGSIYISG
LTPGVEYTYSVQPVINGHGQGNPITRRVVTPLSPPTDLSLVTNPNTGELTVQWNEASTPD
ITGYRVTCSPTNGQQGNSLEEFVKAGQTSCTLDNLSPGVEYNVSVFTVKDDMESVPISST
ITPDVPQLTDLHFVNITDSTIGLTWSPIDSTAITGYRITVVAAGDSVPIFEDFVESTRDT
YTVYGLEPGIDYDISIITVTEKGESKPTTITQQTAVPAPTGLKFSDITADNMTVSWTAPT
VPKPNEIDRYIIHYHPVDDENDNTERVVDGNVHRVILRHLIPNTEYMVSVFSVYEERQSS
PVISTQRTILDSPVKLVFSDIGTNAFTIHWLPPKASISGYRIRYQMTSGGRSKEERLPPS
RSHFTLTGLTPETEYTISIFAVSGTRESQPLTGTQATISDAPTDLEVTSSTPTSITVRWD
APSVSVRYYRITHGESGGHSSPKEFTVPGSQTTATIEGLRPGTEYTITVYAVTGRGDSPA
SSTPIYVTHKTDIESPSEMEVTDVKDSTITVRWTPAAGPVTGYRITGTPRNGSGPSFSEV
VAPDQTEMTFSGLMPTAEYTLSVYALGQDGESPPLVETVITTVDKPKDLAFSEVDSTSLR
ISWESPDGEVTSYRVLYSSSEEGERELFPAPRGADESALLHGLRPGTEYTVKVIALHDRT
PSPPLVGIQTTAIPGPTNLQFSQVGATSFTVSWYSGPNIQLTGYRVAITPKNKNGPTKEV
NIAPDSTQYHATGLMPATEYEVELYAVKNSLTSRPVKGDITTPDNISPPRRVRISNLKDS
SITLTWRSKTDAISGFLVEATPTIGGHNPILKTIPPESRTYTITGLQPGTSYKINIYTLN
GNARSEPFTIAATTAKPVISPPANIRFTSLTPNTISFSWEPPQSIITGYYITYEEVEGIP
RELVPRPLAGRTSATISGLKPSTEYIIKIVALNNAQRSTALVGKARTQVEELSPQLPVSH
RPRPGMLDVPNEENLNSNHVHLVGPNRHDTLGQQGQHIYTEYQSLGLANRGQHQPLAPHH
GEPLVYIPLPGPDGHRIPVVRLNEGTLPGLSFENPFNETELPQEARTQTTITWPGVPHSS
EYVVSCSPITEIDEQSFQMHLPGSSTSATLIGLTSGASYKIIVESVNGENKEKVLEDVVT
VGNTVPGHGPGAGVVPVGRDVCYDTFTATYHEVGAEWERMSETGFKLWCRCLGLGSGHFR
CDSSKWCHDNGHNYRIGEKWDRQAENGQMMSCTCLGNGKGEFKCEPHEATCYDEGKMYKV
GDKWQKEYLGSICTCTCYGGQQGWRCENCRRPGTEVNVDLIQPPVHTDVYDRYRENALRK
LNIQCPIECLRPDLLADAQSPLK
NT seq 7452 nt   +upstreamnt  +downstreamnt
atgtccggtggctgtctggccacggtgctggtggtgctgctgttctccggcgctgtgctc
tgcatgcccaaaagcgcacggaaaagcaggaggcaggcgcacgagcgctccagatcatcc
gtttctcaagatggctgtgtagagtatggtcagttttatggagttggtgagcagtgggaa
cgcacctatctgggcactgtgctcctctgcacttgccatggagtggctggtattaagtgt
aaaacgaagcctgaggctgaggagacttgttatgacaaagtaaatgctcgatcataccgg
gtgggagagacctacgaaaggccaaaggatgggatgatctgggactgcacgtgcattggc
tctggaagagggaaaatcagctgcactattgcaaaccgctgccatgaagggggacattct
tataagattggagacacttggatgagacctcatgacactggagattacatgctggagtgt
gtctgtttgggcaatgggaaaggggaatggacctgcaaacctatcgcggagcgctgttat
gataatgcagctggcacctcttacacagtgggggaaacctgggagaaaccttaccaaggc
tggatgattgtcgactgcacctgtttaggggagggaagtggacgcatcacttgcacatct
agaaaccgctgcaatgaccaggacttacgcatgtcttaccgcattggggatacttggact
aagacagatgcccatggaaacatcttgcagtgtttgtgcactggtaatggccgtggagag
tggaaatgcgaaaggcatgcttccttgcacactactggtcttggcactggttctcgtgtg
atcaccaacttacagccggctgtgttccaacctgtgccccttcctgtggcccctactgag
ggcacctgtgtaacggactcaggaatctcctatactttgggcatgcgctggatcaagact
cagggaagcaagcagatgttatgtacctgcctgggaaatggtgtcagctgtaaagagtgg
gagggccattctcaagtttatggtggcaattcaaacggccagccgtgtgttttcccattt
gtgtccatgggcaagaccttctactcgtgcacctcagagggacgtgatgatgggcagctt
tggtgtagtaccacttctgactttgaaaaagatcaccagtactccttctgcacagaaaag
aatgttttggttacaaccagaggaggaaactccaatggcgcactgtgccacttccctttc
ctttataatggccataactacacagactgcacagctgatggacgcagggatggcatgaag
tggtgcggcaccacatataattttgatggagagaagcagtatggtttctgccccatggct
gcccatgaggaggtctgcactactagcgaaggagtaatgtaccgtgtgggagatcagtgg
gataaacggcatgacgttttgggtcacatgatgcgctgcacttgtgtaggaaacggacgt
ggggagtggagttgcattgcctactcacagctcaaagaccagtgcattgtggatggcctg
acttatgaggtgaaccaaaccttcactaaacgtcatgatgagggctacatgatgaactgc
acctgcttcggccagggccgtggacgctggaagtgtgacgccattgaccagtgccaggag
ccagacaccaaagttttctatcagatcggagagtcgtgggacaaggtcatccatggactt
cgctacaagtgtttctgcaatggcaatgggcttggagaggtgagctgtgagccccagcac
tcattccatggtggtactcgtccagtacaggtgattattacagaagctggcaaccagccc
aattcgcacccaatccagtggaacgctgccccctctgctcatatcgtccagtatgtcctc
aagtggcgagagaaaaacactcgtattccatggagggaagttacccttccaggccatctc
acttcttataccattgctggactgaagcctggcatcacctatgagggtcagctcatcagt
attttaagacttggtcgcagagaggtcactcgctttgacttcactaccaactacggctcc
ttggctacaactgaaggagacacgaatcctccacctccagtggtggacacctcagagtct
gtgactgagatcacttccagcagcttcgtcatctcctgggtttctgcctctgacaccgtg
tccggtttcagagtggagtatgagctcactgaagagggaggacagcaaggagaacccatg
gttttggatcttccacgtacggctacctctgtgaatctcagtgagctcctgccaggcaga
aaatacactgttaatgtgtatgaaattactgatgagggaaactccagtctaatcctcacc
acatcccagactacagctcctgatgctcctacagatcacgaggtgggggatgtagatgag
acttccatcacggtcagatggtctaaacctctggctccaatcacaggctaccgtgtggtt
tacactccatctgttgaagggagctctggcagcactgagctgaccctgcccaacacggag
acctctgtgactcttagtgaccttcaacctggccagctatataacatcagtatctatgct
gtagaagagaatctggagagtgagcccgtgtttgtgcaggtcaacactgctggagaacca
gtgctagaggaaatcccatccccgactgacctgcagttcttcgaggtgtctgactcgaag
atcaccatcacttggactgcttctcctgatgtctctgggtaccgtgtgtcagtaggtcaa
gttggtgctgatggactaatcgagcaacagacagtgctacccatcatgcacaatacttac
gcagaggtcacgccgctagagcctggaaccatctaccgcttctttatttttgccatcaag
gccggagaagagagcgagccgctggttggagagcatgccactaaacctgatgcccccacc
aacttccacttggccaatgtgactgaggacagtgctctgatcatctggtcagctcccaga
gctcagatcactcgttacagactcttcctgactgtagaaggatcgaaccctaaacagttg
cacctcccaagccgcctgacacagtacacacttctgaaccttcagccagacacgcaatac
acagccacactgcattctgagaagggcaatgtgctcagcgagggcgccacactgaccttc
agcacctccttgccaatgagaaatgcccctcgtttcacaactgatgtcacagacacctcc
attgtaatttcctggaatcctgttcccagaattggatataagttaactgtgaagcccagt
caaggcggagaagcccccagggaggtgacttctgaatcaggaagcatttacatctctggc
ctgactcctggagtggagtacacttacagcgtgcagccggtcatcaacggccacgggcaa
ggcaaccccatcacacgtcgtgttgtcacacctctgtctccacccactgatctcagcttg
gtaacaaacccaaacactggagagctaacggtccagtggaatgaagccagcactccagat
atcacaggctacagagtgacttgcagtcccactaatggccagcagggtaactctctggag
gagtttgtgaaggcgggccagacctcgtgcactctggataacctgagccctggagtggag
tacaacgtcagcgtgtttacagtgaaggacgacatggagagcgtgcccatctccagcaca
atcactccagacgtgccccagctaacagacctccactttgtcaatatcactgattccacg
attggcctcacatggagtcccattgactccactgctataactggttaccgcatcacggtg
gtggctgcgggtgatagtgtacccatttttgaggactttgtggagtctaccagggatacc
tacaccgtgtatggcctggagcctggcatcgactatgacatcagcatcatcacagtgact
gagaaaggcgagagcaagcccaccaccatcacacagcaaacagctgtgccagccccgaca
ggcctaaagttcagtgatatcactgctgacaacatgactgtgagctggactgcccccact
gtccccaagcctaacgagattgaccgctacattatccactatcacccagtcgatgatgag
aatgacaacaccgagcgggttgtggatggaaacgtccacagggtcattcttcgccatctt
atacccaacactgaatacatggtgagtgtgttctctgtttatgaagaaaggcagagctca
cctgtaatcagtactcaaagaaccatcctggattcccctgttaaactggttttctctgac
attggtacaaacgccttcaccatacactggctgcctcctaaagccagcatctctggctac
cgtattcgttatcagatgaccagtggaggacgctccaaggaggagagactgccaccttcc
aggagccacttcacactgacaggcctaactcctgagactgagtacaccatcagcatattt
gctgtgagcggcacccgtgaaagtcagcccctcaccggaacccaggccaccatctctgat
gcccctactgacctggaggtcacttcttcaacaccgaccagcatcactgttcgatgggac
gccccctctgtcagcgtgaggtactaccggatcacacatggagagtcaggtggtcacagc
tctcctaaagagttcactgtccctggctctcagaccactgccactatagagggtctgcgc
ccaggcaccgaatacaccatcaccgtgtacgctgtgacaggcagaggagacagccccgcc
tccagcacacccatctatgtcactcacaaaacagatattgagtctccatctgagatggag
gtgactgatgtaaaggacagcaccatcactgtacgctggacaccagctgccggtcccgtc
actggatatcgcatcactggaactccccgaaatggcagcggaccctccttctctgaagtg
gttgctccagaccagacagagatgacattctccgggttgatgcctacagcagagtacacg
ctcagtgtttatgctctgggacaagatggagagagccctcctctggtagagactgtaatt
accactgtggacaagccaaaggacttagccttctctgaagtggactcgacatccttgcgg
atttcttgggagagtcctgatggggaggtgacctcatacagagtgctgtactccagctca
gaagagggcgagagagagctgttccctgctcctcgtggtgcagacgaatctgcattgctg
catgggctccggcctggcactgagtatactgttaaagtcatcgcccttcatgaccgcact
cccagtcctccacttgttggcatccagaccacagctattcctggccctaccaatctccag
ttctctcaggttggtgccacttcctttaccgtgtcctggtattcaggacctaatatccag
ctgactggctaccgtgtggccatcactcccaagaacaagaatgggcctactaaagaggtc
aacattgcacctgactccacacagtaccatgccactggactcatgcctgccactgagtat
gaagtggagctttatgctgtaaagaattctcttaccagccgtccagtcaagggagacatc
acgactcctgacaacatcagtccccctcgtcgtgttcggatctctaacttgaaggatagc
tccatcacattgacctggcgctctaagactgatgccatctctggcttcctagtggaggcc
acacccactatcggaggtcacaaccccatcttgaagaccatcccccctgaatcccgcacc
tacaccatcactggtctacagccaggtacctcctacaagatcaacatttacactctgaat
gggaatgcccgcagtgaaccgttcaccatcgcagccaccacagctaagccagtgatcagc
ccaccagcaaatatccgctttacctccctgacccccaacaccatctccttctcctgggaa
cctccccaaagcatcatcacaggatattacataacctacgaggaagttgaaggcatccca
agagagcttgtcccaagacctctcgctggccgaacatccgccactatctccggtttgaag
ccaagcactgaatacatcattaaaattgttgcactaaacaatgcacaaagaagcactgca
ctcgtgggcaaggccagaacccaagtggaagagttgtcccctcagcttccagtgtctcac
cggcccagacctggcatgctggatgttcccaatgaagagaacttgaacagcaatcatgtg
cacctggtgggcccaaacagacatgacacacttgggcagcagggtcaacacatctacacc
gagtatcagagtctgggtctggccaaccgtggacagcatcagcccctggctccacaccac
ggtgagccgctggtctacattcctctgccagggccagatggccacagaattccggtggtg
aggttgaatgaaggcactttgcctgggttgtcctttgagaaccctttcaatgagacagag
ctgcctcaggaagcccggacacagaccactatcacatggccaggagtgccacacagctca
gagtatgtggtgtcctgtagtcccattacagagatcgatgagcagagcttccagatgcat
cttcctggctcctccaccagtgctacattgatcggtcttacttcaggagcctcctataaa
atcattgtggagtctgtcaatggagagaacaaggagaaagttctggaagatgttgtgacc
gttggcaacacagttccaggacatggcccaggagctggagtggtgcctgtaggcagggat
gtatgctatgacacattcactgccacctaccatgaggtgggggctgagtgggagcgcatg
tccgagacaggctttaagctctggtgcaggtgtctcggccttggcagtggccatttcaga
tgtgattcatccaagtggtgtcacgataatggccataactatcggatcggggagaaatgg
gaccgccaagctgagaacggccaaatgatgagctgcacctgcctgggcaacgggaaagga
gagttcaagtgcgagccacatgaagctacatgttatgatgaaggaaagatgtacaaggtt
ggagataagtggcagaaagagtaccttggcagcatctgcacctgcacatgctatggtgga
cagcagggctggcgttgcgagaactgtcgtcggccaggtactgaggtaaatgttgacctc
atccagcctccagtgcacacagacgtttatgaccgctacagagagaatgccctacgcaaa
ctgaacatccagtgtcccatcgagtgcctcagacctgacctgctagcagatgcccagagc
cctttgaaataa

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